C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ninein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422516 NINL-201 ENSG00000101004 9606 - 20:25452826-25585517 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainLiverMuscleOvaryPlacentaTestisENST00000422516
Transcript ID Adipose Brain Liver Muscle Ovary Placenta Testis
ENST00000422516 0.405±0.00 0.560±0.29 0.104±0.00 0.011±0.00 1.121±0.00 1.260±0.00 2.250±1.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XS CIL_0000XS_0001 CGP 20:25407727-25585517
CIL_0001A4 CIL_0001A4_0001 CGP 20:25452705-25624175

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0005509 IEA calcium ion binding
GO:0005829 TAS cytosol
GO:0005874 IEA microtubule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109896 Ninl-001 protein_coding Mus_musculus 0 1740
ENSMUST00000150595 Ninl-006 protein_coding Mus_musculus 0 507
ENSMUST00000149979 Ninl-002 processed_transcript Mus_musculus 0 370
ENSMUST00000128627 Ninl-004 protein_coding Mus_musculus 0 364
ENSMUST00000128564 Ninl-003 processed_transcript Mus_musculus 0 363
ENSMUST00000149268 Ninl-005 processed_transcript Mus_musculus 7.00649e-45 187

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