C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein L, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422706 APOL1-202 ENSG00000100342 9606 + 22:36253071-36267530 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000422706
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000422706 3.111±0.00 10.224±0.00 0.259±0.00 8.278±0.00 12.313±0.00 4.511±0.00 6.720±0.00 16.633±0.00 4.950±0.00 6.940±0.00 4.365±3.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GS CIL_0003GS_0003 CGP 22:36226203-36267530
CIL_0003GV CIL_0003GV_0001 CGP 22:36253010-36388018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005254 IDA chloride channel activity
GO:0005515 IPI protein binding
GO:0005576 IEA:TAS extracellular region
GO:0005615 IDA extracellular space
GO:0006821 IDA chloride transport
GO:0006869 IEA lipid transport
GO:0008203 IEA cholesterol metabolic process
GO:0008289 IEA:IDA lipid binding
GO:0019835 IDA cytolysis
GO:0031224 IC intrinsic component of membrane
GO:0031640 IDA killing of cells of other organism
GO:0034361 IDA very-low-density lipoprotein particle
GO:0034364 IDA high-density lipoprotein particle
GO:0042157 IEA lipoprotein metabolic process
GO:0045087 IDA innate immune response
GO:0072562 IDA blood microparticle
GO:1902476 IDA chloride transmembrane transport

Homologs

No Homologs available.

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