C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: thioredoxin-like 4B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423037 TXNL4B-201 ENSG00000140830 9606 - 16:72084859-72093869 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098E CIL_00098E_0001 VISTA 16:71920667-72521926
CIL_00098B CIL_00098B_0001 VISTA 16:71941307-72542883
CIL_0002Q2 CIL_0002Q2_0001 CGP 16:72044289-72094431

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0007067 IEA mitotic nuclear division
GO:0008380 IEA RNA splicing
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178445 Txnl4b-201 protein_coding Mus_musculus 0 555
ENSMUST00000034159 Txnl4b-001 protein_coding Mus_musculus 0 555
ENSDART00000109083 txnl4b-002 protein_coding Danio_rerio 0 281
ENSDART00000081945 txnl4b-001 protein_coding Danio_rerio 0 281
ENSMUST00000030474 Nsun4-002 nonsense_mediated_decay Mus_musculus 0.0002 53

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