C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thioredoxin-like 4B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140830 TXNL4B 9606 - 16:72044289-72094431 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000268483 TXNL4B-001 72084853-72093651 protein_coding
  ENST00000423037 TXNL4B-201 72084859-72093869 protein_coding
  ENST00000426362 TXNL4B-003 72086397-72094431 protein_coding
  ENST00000562153 TXNL4B-002 72044289-72093557 protein_coding
  ENST00000565171 TXNL4B-004 72086715-72093552 nonsense_mediated_decay
  ENST00000569767 TXNL4B-005 72088987-72093869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000268483ENST00000562153
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000268483 7.343±0.00 1.262±0.00 4.311±1.97 2.463±0.00 4.145±0.00 2.904±0.00 3.774±0.75 3.015±0.00 2.925±0.00 1.721±0.00 3.330±1.12 2.778±0.71 9.755±0.00
ENST00000562153 N/A N/A N/A N/A N/A N/A 12.934±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098E CIL_00098E_0001 VISTA 16:71920667-72521926
CIL_00098B CIL_00098B_0001 VISTA 16:71941307-72542883
CIL_0002Q2 CIL_0002Q2_0001 CGP 16:72044289-72094431

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0007067 IEA mitotic nuclear division
GO:0008380 IEA RNA splicing
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058962 txnl4b thioredoxin-like 4B protein_coding Danio_rerio
ENSMUSG00000031723 Txnl4b thioredoxin-like 4B protein_coding Mus_musculus

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