C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RecQ protein-like 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423245 RECQL5-002 ENSG00000108469 9606 - 17:75626854-75667142 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000423245
Transcript ID Kidney
ENST00000423245 1.503±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_0007IO CIL_0007IO_0001 CGP 17:75626845-75667189

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0006310 IEA DNA recombination
GO:0008026 IEA ATP-dependent helicase activity
GO:0031965 IDA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021097 Recql5-001 protein_coding Mus_musculus 0 2381
ENSMUST00000140174 Recql5-002 nonsense_mediated_decay Mus_musculus 0 1676
ENSMUST00000144824 Recql5-004 retained_intron Mus_musculus 0 1491
ENSMUST00000134208 Recql5-003 nonsense_mediated_decay Mus_musculus 0 789
ENSMUST00000131578 Recql5-007 nonsense_mediated_decay Mus_musculus 0 614
ENSMUST00000147172 Recql5-008 processed_transcript Mus_musculus 0 329
ENSMUST00000156776 Recql5-006 retained_intron Mus_musculus 0 243

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