C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RecQ protein-like 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140174 Recql5-002 ENSMUSG00000020752 10090 - 11:115892595-115933477 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000140174
Transcript ID Breast
ENSMUST00000140174 1.234±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_0007IO CIL_0007IO_0002 CGP 11:115892595-115933477

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006310 IEA DNA recombination
GO:0008026 IEA ATP-dependent helicase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317905 RECQL5-001 protein_coding Homo_sapiens 0 1676
ENST00000340830 RECQL5-004 protein_coding Homo_sapiens 0 889
ENST00000420326 RECQL5-020 protein_coding Homo_sapiens 0 889
ENST00000423245 RECQL5-002 protein_coding Homo_sapiens 0 1676
ENST00000443199 RECQL5-007 processed_transcript Homo_sapiens 0 1131
ENST00000578201 RECQL5-005 protein_coding Homo_sapiens 0 937
ENST00000580078 RECQL5-010 protein_coding Homo_sapiens 0 597
ENST00000580707 RECQL5-014 protein_coding Homo_sapiens 0 809
ENST00000582464 RECQL5-011 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000583673 RECQL5-012 processed_transcript Homo_sapiens 0 222
ENST00000584999 RECQL5-003 protein_coding Homo_sapiens 0 902

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