C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423483 RP11-731I19.1-001 ENSG00000225991 9606 + 2:28308161-28308570 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000423483
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000423483 0.113±0.00 0.657±0.00 3.205±0.00 1.761±0.00 1.080±1.04 0.843±0.69 0.564±0.00 0.285±0.00 1.780±0.00 0.779±0.02 0.416±0.00 1.222±0.78 0.108±0.00 0.194±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JP CIL_0003JP_0002 CGP 2:27781364-28338901
CIL_0003JO CIL_0003JO_0002 CGP 2:27889941-28417312
CIL_0007QQ CIL_0007QQ_0001 VISTA 2:28011439-28613196
CIL_0009C6 CIL_0009C6_0001 VISTA 2:28011444-28613228

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118798 Gm7312-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000119619 Gm7219-001 processed_pseudogene Mus_musculus 2.94273e-44 182
ENSMUST00000117846 Gm11673-001 processed_pseudogene Mus_musculus 3e-19 99
ENSMUST00000161498 Gm16303-001 processed_pseudogene Mus_musculus 0.000000000005 75

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