C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11673
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117846 Gm11673-001 ENSMUSG00000081293 10090 + 2:143877949-143878279 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DJ CIL_0002DJ_0002 CGP 2:143826528-143943324
CIL_0008YD CIL_0008YD_0002 VISTA 2:143876906-144478692

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000395315 RPL23AP32-001 processed_pseudogene Homo_sapiens 1e-24 117
ENST00000412728 AC104634.2-001 processed_pseudogene Homo_sapiens 1e-18 97
ENST00000417214 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 4e-29 132
ENST00000423039 RPL23AP51-001 transcribed_processed_pseudogene Homo_sapiens 3e-35 152
ENST00000423483 RP11-731I19.1-001 processed_pseudogene Homo_sapiens 3e-19 99
ENST00000423801 AC090043.1-001 processed_pseudogene Homo_sapiens 8e-31 137
ENST00000426806 RP11-401L13.5-001 processed_pseudogene Homo_sapiens 9e-28 126
ENST00000428990 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 4e-29 132
ENST00000430582 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 4e-29 132
ENST00000433438 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 4e-29 132
ENST00000434984 RPL23AP83-001 processed_pseudogene Homo_sapiens 6e-27 124
ENST00000435229 Z97634.3-001 transcribed_processed_pseudogene Homo_sapiens 8e-26 121
ENST00000438548 RPL23AP46-001 processed_pseudogene Homo_sapiens 1.99993e-41 172
ENST00000439311 AC005007.3-001 processed_pseudogene Homo_sapiens 8e-21 104
ENST00000446846 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 4e-29 132
ENST00000453844 RPL23AP3-001 processed_pseudogene Homo_sapiens 8e-31 137
ENST00000457760 Z97634.3-002 processed_transcript Homo_sapiens 2e-25 121
ENST00000458419 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 8e-31 137
ENST00000467573 RPL23AP12-001 processed_pseudogene Homo_sapiens 2e-32 143
ENST00000471227 RPL23AP2-001 processed_pseudogene Homo_sapiens 5e-38 161
ENST00000476735 TMEM8A-007 processed_transcript Homo_sapiens 2e-18 97
ENST00000482216 RP11-510I6.1-001 processed_pseudogene Homo_sapiens 5e-23 111
ENST00000514593 GS1-24F4.1-001 processed_pseudogene Homo_sapiens 8e-27 124
ENST00000623642 AL589822.1-201 pseudogene Homo_sapiens 3e-25 119

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