C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KIAA1109
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424425 KIAA1109-004 ENSG00000138688 9606 + 4:122186181-122239929 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartOvaryENST00000424425
Transcript ID Breast Heart Ovary
ENST00000424425 7.899±0.00 3.713±0.00 6.998±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AC CIL_0007AC_0001 CGP 4:121879027-122362758
CIL_0007AD CIL_0007AD_0001 CGP 4:122152333-122429802

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009235 IEA cobalamin metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057272 4932438A13Rik-201 protein_coding Mus_musculus 0 5003
ENSMUST00000152564 4932438A13Rik-001 protein_coding Mus_musculus 0 5003
ENSMUST00000152881 4932438A13Rik-008 nonsense_mediated_decay Mus_musculus 0 4442
ENSMUST00000123916 4932438A13Rik-011 retained_intron Mus_musculus 0 4196
ENSMUST00000128061 4932438A13Rik-005 nonsense_mediated_decay Mus_musculus 0 3044
ENSMUST00000108145 4932438A13Rik-017 retained_intron Mus_musculus 0 2876
ENSMUST00000139219 4932438A13Rik-015 retained_intron Mus_musculus 0 813
ENSMUST00000143675 4932438A13Rik-014 retained_intron Mus_musculus 0 760
ENSMUST00000129721 4932438A13Rik-013 retained_intron Mus_musculus 0 470
ENSMUST00000136287 4932438A13Rik-012 retained_intron Mus_musculus 0 411

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