C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 274
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424679 ZNF274-001 ENSG00000171606 9606 + 19:58183029-58213562 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000424679
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000424679 1.384±0.00 0.437±0.00 2.659±1.74 2.223±0.00 2.992±0.00 1.030±0.79 2.698±0.00 1.092±0.00 1.563±0.79 2.155±0.00 3.448±2.44 1.669±0.00 4.802±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000551 CIL_000551_0001 CGP 19:58126252-58213562

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003714 TAS transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005730 TAS nucleolus
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IDA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168247 Zfp110-201 protein_coding Mus_musculus 0 449
ENSMUST00000004614 Zfp110-001 protein_coding Mus_musculus 0 449
ENSMUST00000144578 Zfp128-001 protein_coding Mus_musculus 3e-31 141
ENSMUST00000081891 Zfp128-002 retained_intron Mus_musculus 3e-31 141
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 3e-17 95
ENSMUST00000094116 Zscan25-201 protein_coding Mus_musculus 3e-17 95
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 1e-16 94
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 1e-16 94
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 1e-16 94
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 1e-16 94
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 1e-16 94
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 0.000000000003 79
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 0.000000000003 79
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 0.000000000003 79
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 0.000000000003 79
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 0.000000000003 79
ENSMUST00000161896 Zkscan5-003 nonsense_mediated_decay Mus_musculus 0.00000000004 75
ENSMUST00000031601 Zkscan5-002 protein_coding Mus_musculus 0.00000000004 75
ENSMUST00000085671 Zkscan5-001 protein_coding Mus_musculus 0.00000000004 75

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