C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424697 ZNF3-202 ENSG00000166526 9606 - 7:100069972-100081764 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000424697
Transcript ID Adrenal Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000424697 3.744±0.00 0.579±0.00 3.407±0.00 1.264±0.03 4.716±2.28 1.545±0.00 1.293±0.00 2.576±0.72 4.011±0.81 2.767±0.00 2.070±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804
CIL_0002F6 CIL_0002F6_0001 CGP 7:100015572-100065038
CIL_0005LO CIL_0005LO_0001 CGP 7:100049774-100082548
CIL_0002GB CIL_0002GB_0001 CGP 7:100064033-100092200

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 NAS DNA binding
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IC nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0008270 NAS zinc ion binding
GO:0030154 IEA cell differentiation
GO:0042802 IPI identical protein binding
GO:0045321 NAS leukocyte activation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049393 Zfp113-001 protein_coding Mus_musculus 0 1552
ENSMUST00000165640 Zfp113-201 protein_coding Mus_musculus 0 1469
ENSMUST00000144786 Zfp113-003 processed_transcript Mus_musculus 0 309
ENSMUST00000023179 Zfp7-201 protein_coding Mus_musculus 0 230
ENSMUST00000034382 Zfp90-201 protein_coding Mus_musculus 5e-35 154
ENSMUST00000166005 Zfp426-201 protein_coding Mus_musculus 2e-24 119
ENSMUST00000163348 Zfp426-012 protein_coding Mus_musculus 2e-24 119
ENSMUST00000080386 Zfp426-002 protein_coding Mus_musculus 2e-24 119
ENSMUST00000169558 Zfp426-004 protein_coding Mus_musculus 2e-24 119
ENSMUST00000167457 Zfp426-003 protein_coding Mus_musculus 2e-24 119
ENSMUST00000115562 Zfp426-001 protein_coding Mus_musculus 2e-24 119
ENSMUST00000168095 Zfp426-008 nonsense_mediated_decay Mus_musculus 2e-24 119
ENSMUST00000180024 Zfp850-202 protein_coding Mus_musculus 5e-20 104
ENSMUST00000180502 Zfp850-002 protein_coding Mus_musculus 5e-20 104
ENSMUST00000165956 D3Ertd254e-201 protein_coding Mus_musculus 1e-16 94
ENSMUST00000116324 Zfp819-201 protein_coding Mus_musculus 1e-16 94
ENSMUST00000032661 Zfp819-001 protein_coding Mus_musculus 1e-16 94
ENSMUST00000120935 Zfp819-002 protein_coding Mus_musculus 1e-16 94
ENSMUST00000174407 Zfp141-001 protein_coding Mus_musculus 0.000000000000001 90
ENSMUST00000060063 Zfp846-201 protein_coding Mus_musculus 0.00000000000006 84
ENSMUST00000140668 Zfp846-001 nonsense_mediated_decay Mus_musculus 0.00000000000006 84
ENSMUST00000115557 Zfp846-002 protein_coding Mus_musculus 0.00000000000006 84
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 0.00000000000006 84
ENSMUST00000053722 Zfp607-201 protein_coding Mus_musculus 0.0000000000002 82
ENSMUST00000109914 Zfp345-001 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000109922 Gm14124-001 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000109929 Gm14139-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000109926 Gm14139-001 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000076281 Zfp781-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000105316 Gm3055-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000058104 Zfp719-001 protein_coding Mus_musculus 0.000001 60
ENSMUST00000110216 Zfp930-201 protein_coding Mus_musculus 0.000001 60

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