C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 44
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424827 RPL7P44-001 ENSG00000233873 9606 - 13:76981175-76981916 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000424827
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000424827 0.116±0.00 0.137±0.00 0.052±0.00 0.133±0.00 0.110±0.00 0.069±0.00 0.077±0.00 0.016±0.00 0.069±0.05 0.051±0.00 0.047±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004A CIL_00004A_0001 CGP 13:76948497-77002517

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 736
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 719
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000118553 Gm8534-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000148424 1700073E17Rik-001 transcribed_processed_pseudogene Mus_musculus 0 571
ENSMUST00000152419 1700073E17Rik-002 processed_transcript Mus_musculus 0 571
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 473
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 237
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 237

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