C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425092 NPM1P30-001 ENSG00000228219 9606 + 10:21110682-21113388 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000425092
Transcript ID Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000425092 0.358±0.00 0.082±0.03 0.014±0.00 0.025±0.00 0.180±0.00 0.159±0.15 0.013±0.00 0.026±0.00 0.010±0.00 0.093±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118871 Gm15484-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000164523 Gm5611-201 protein_coding Mus_musculus 0 351
ENSMUST00000172394 Gm17060-001 processed_pseudogene Mus_musculus 0 191

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