C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5611
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164523 Gm5611-201 ENSMUSG00000090602 10090 + 9:17030045-17030899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164523
Transcript ID Adrenal Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164523 0.880±0.49 0.010±0.00 0.064±0.05 0.066±0.00 0.104±0.04 0.128±0.11 0.135±0.00 0.038±0.00 0.237±0.15 6.258±7.59 0.210±0.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290855 CLEC2D-001 protein_coding Homo_sapiens 0 802
ENST00000296930 NPM1-001 protein_coding Homo_sapiens 0 904
ENST00000343743 NPM1P14-001 processed_pseudogene Homo_sapiens 0 713
ENST00000351986 NPM1-002 protein_coding Homo_sapiens 0 503
ENST00000393820 NPM1-003 protein_coding Homo_sapiens 0 717
ENST00000396690 CLEC2D-001 processed_pseudogene Homo_sapiens 0 795
ENST00000399021 NPM1P31-001 processed_pseudogene Homo_sapiens 0 592
ENST00000399556 NPM1P46-001 processed_pseudogene Homo_sapiens 0 774
ENST00000403105 NPM1P37-001 processed_pseudogene Homo_sapiens 0 859
ENST00000403835 NPM1P38-001 processed_pseudogene Homo_sapiens 0 608
ENST00000412580 NPM1P32-001 processed_pseudogene Homo_sapiens 0 641
ENST00000414095 NPM1P4-001 processed_pseudogene Homo_sapiens 0 701
ENST00000415681 NPM1P36-001 processed_pseudogene Homo_sapiens 0 643
ENST00000423757 NPM1P12-001 processed_pseudogene Homo_sapiens 0 804
ENST00000425092 NPM1P30-001 processed_pseudogene Homo_sapiens 0 351
ENST00000426339 NPM1P26-001 processed_pseudogene Homo_sapiens 0 664
ENST00000427761 NPM1P22-001 processed_pseudogene Homo_sapiens 0 785
ENST00000428039 NPM1P24-001 processed_pseudogene Homo_sapiens 0 451
ENST00000428821 NPM1P34-001 processed_pseudogene Homo_sapiens 0 370
ENST00000429734 NPM1P25-001 processed_pseudogene Homo_sapiens 0 848
ENST00000434232 NPM1P18-001 processed_pseudogene Homo_sapiens 0 699
ENST00000436002 NPM1P48-001 processed_pseudogene Homo_sapiens 0 797
ENST00000438918 NPM1P33-001 processed_pseudogene Homo_sapiens 0 763
ENST00000440193 NPM1P23-001 transcribed_processed_pseudogene Homo_sapiens 0 547
ENST00000444971 CLEC2D-017 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000449818 NPM1P39-001 processed_pseudogene Homo_sapiens 0 920
ENST00000450070 NPM1P19-001 processed_pseudogene Homo_sapiens 0 569
ENST00000452663 NPM1P13-001 processed_pseudogene Homo_sapiens 0 662
ENST00000453156 NPM1P9-001 processed_pseudogene Homo_sapiens 0 819
ENST00000458237 NPM1P8-001 processed_pseudogene Homo_sapiens 0 883
ENST00000483112 NPM1P29-001 processed_pseudogene Homo_sapiens 0 569
ENST00000492269 NPM1P28-001 processed_pseudogene Homo_sapiens 0 601
ENST00000502784 NPM1P27-001 processed_pseudogene Homo_sapiens 0 887
ENST00000512920 NPM1P41-001 processed_pseudogene Homo_sapiens 0 501
ENST00000513394 NPM1P21-001 processed_pseudogene Homo_sapiens 0 643
ENST00000517671 NPM1-004 protein_coding Homo_sapiens 0 904
ENST00000518264 NPM1P52-001 processed_pseudogene Homo_sapiens 0 503
ENST00000518587 NPM1-008 retained_intron Homo_sapiens 0 455
ENST00000519955 NPM1-011 retained_intron Homo_sapiens 0 243
ENST00000521088 NPM1P6-001 processed_pseudogene Homo_sapiens 0 872
ENST00000521260 NPM1-009 retained_intron Homo_sapiens 0 200
ENST00000521672 NPM1-005 protein_coding Homo_sapiens 0 451
ENST00000521710 NPM1-010 retained_intron Homo_sapiens 0 219
ENST00000524204 NPM1-012 retained_intron Homo_sapiens 0 189
ENST00000532878 NPM1P50-001 processed_pseudogene Homo_sapiens 0 695
ENST00000533043 NPM1P35-001 processed_pseudogene Homo_sapiens 0 708
ENST00000557228 NPM1P5-001 processed_pseudogene Homo_sapiens 0 787
ENST00000560329 NPM1P42-001 processed_pseudogene Homo_sapiens 0 719
ENST00000564888 RP11-382N13.3-001 processed_pseudogene Homo_sapiens 0 418
ENST00000578162 NPM1P2-001 processed_pseudogene Homo_sapiens 0 595
ENST00000583151 NPM1P45-001 processed_pseudogene Homo_sapiens 0 283
ENST00000588959 RP11-188I24.1-001 processed_pseudogene Homo_sapiens 0 257
ENST00000604799 RP11-681H10.1-001 processed_pseudogene Homo_sapiens 0 239

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