C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SHC (Src homology 2 domain containing) transforming protein 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425230 SHC1P1-001 ENSG00000230889 9606 + X:64432401-64434145 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungTestisENST00000425230
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Testis
ENST00000425230 0.010±0.00 0.099±0.00 0.013±0.00 0.048±0.00 0.043±0.00 0.046±0.00 0.063±0.00 0.031±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094378 Shc1-002 protein_coding Mus_musculus 0 1759
ENSMUST00000191485 Shc1-201 protein_coding Mus_musculus 0 1452
ENSMUST00000107417 Shc1-003 protein_coding Mus_musculus 0 1452
ENSMUST00000039110 Shc1-001 protein_coding Mus_musculus 0 1452
ENSMUST00000137793 Shc1-008 protein_coding Mus_musculus 0 911
ENSMUST00000146306 Shc1-009 processed_transcript Mus_musculus 0 623
ENSMUST00000125036 Shc1-005 protein_coding Mus_musculus 0 592
ENSMUST00000153334 Shc1-004 retained_intron Mus_musculus 0 520
ENSMUST00000128238 Shc1-007 protein_coding Mus_musculus 0 512
ENSMUST00000154791 Shc1-006 protein_coding Mus_musculus 0 396

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