C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: src homology 2 domain-containing transforming protein C1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153334 Shc1-004 ENSMUSG00000042626 10090 + 3:89420633-89424043 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLungOvaryTestisENSMUST00000153334
Transcript ID Brain Heart Lung Ovary Testis
ENSMUST00000153334 0.757±0.38 1.626±0.00 4.785±0.00 2.558±0.00 0.070±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366442 SHC1-009 protein_coding Homo_sapiens 0 344
ENST00000368445 SHC1-001 protein_coding Homo_sapiens 0 845
ENST00000368450 SHC1-007 protein_coding Homo_sapiens 0 357
ENST00000368453 SHC1-006 protein_coding Homo_sapiens 0 357
ENST00000412170 SHC1-008 protein_coding Homo_sapiens 0 359
ENST00000425230 SHC1P1-001 processed_pseudogene Homo_sapiens 0 520
ENST00000448116 SHC1-002 protein_coding Homo_sapiens 0 845

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