C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425270 RP11-312J18.5-001 ENSG00000213080 9606 + 1:160894980-160896076 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyOvaryPlacentaTestisENST00000425270
Transcript ID Adipose Breast Heart Kidney Ovary Placenta Testis
ENST00000425270 0.011±0.00 0.012±0.00 0.011±0.00 0.033±0.00 0.050±0.00 0.068±0.00 0.011±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CU CIL_0000CU_0006 CGP 1:160876539-160954799

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121773 Gm14680-001 processed_pseudogene Mus_musculus 0 1443
ENSMUST00000112529 Sms-001 protein_coding Mus_musculus 0 1443
ENSMUST00000120712 Gm6292-001 processed_pseudogene Mus_musculus 0 1295
ENSMUST00000145477 Sms-005 nonsense_mediated_decay Mus_musculus 0 987
ENSMUST00000127089 Sms-003 retained_intron Mus_musculus 0 870
ENSMUST00000123770 Sms-002 protein_coding Mus_musculus 0 307
ENSMUST00000146026 Sms-004 retained_intron Mus_musculus 0 276

Loading