C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermine synthase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112529 Sms-001 ENSMUSG00000071708 10090 - X:157443855-157492287 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112529
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112529 0.810±0.39 1.250±0.41 3.736±0.26 20.399±7.21 2.027±0.36 1.082±0.51 4.222±0.22 3.052±0.86 2.416±2.37 2.656±0.39 22.330±1.09 1.624±0.39 2.714±1.11 0.517±0.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0006597 IEA spermine biosynthetic process
GO:0008152 IEA metabolic process
GO:0016768 IEA spermine synthase activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379404 SMS-002 protein_coding Homo_sapiens 0 1109
ENST00000404933 SMS-003 protein_coding Homo_sapiens 0 2119
ENST00000425270 RP11-312J18.5-001 processed_pseudogene Homo_sapiens 0 1443
ENST00000454078 RP11-134K13.2-001 processed_pseudogene Homo_sapiens 0 1417
ENST00000457085 SMS-004 protein_coding Homo_sapiens 0 809
ENST00000513990 CTC-235G5.2-001 processed_pseudogene Homo_sapiens 0 1062
ENST00000514009 RP11-447H19.3-001 processed_pseudogene Homo_sapiens 0 1055

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