C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermine synthase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145477 Sms-005 ENSMUSG00000071708 10090 - X:157445696-157492066 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000145477
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000145477 1.983±1.18 16.672±1.85 3.505±0.42 13.771±4.06 5.242±1.85 4.097±1.18 3.904±1.47 9.880±2.40 5.906±4.30 5.811±1.46 9.565±1.01 6.203±3.49 17.250±12.40 0.854±0.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0006597 IEA spermine biosynthetic process
GO:0008152 IEA metabolic process
GO:0016768 IEA spermine synthase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379404 SMS-002 protein_coding Homo_sapiens 0 582
ENST00000404933 SMS-003 protein_coding Homo_sapiens 0 1157
ENST00000425270 RP11-312J18.5-001 processed_pseudogene Homo_sapiens 0 987
ENST00000454078 RP11-134K13.2-001 processed_pseudogene Homo_sapiens 0 983
ENST00000457085 SMS-004 protein_coding Homo_sapiens 0 809
ENST00000513990 CTC-235G5.2-001 processed_pseudogene Homo_sapiens 0 726
ENST00000514009 RP11-447H19.3-001 processed_pseudogene Homo_sapiens 0 196

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