C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone deacetylase 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425430 HDAC11-006 ENSG00000163517 9606 + 3:13480306-13504956 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverMuscleENST00000425430
Transcript ID Bladder Brain Breast Heart Liver Muscle
ENST00000425430 1.325±0.00 4.072±0.00 1.647±0.00 0.495±0.00 0.619±0.00 4.305±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000518 CIL_000518_0001 CGP 3:13316235-13506424
CIL_0004U8 CIL_0004U8_0002 CGP 3:13479724-13638422

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155007 Hdac11-002 protein_coding Mus_musculus 0 568
ENSMUST00000041736 Hdac11-001 protein_coding Mus_musculus 0 568
ENSMUST00000134154 Hdac11-006 retained_intron Mus_musculus 0 366
ENSMUST00000143621 Hdac11-005 protein_coding Mus_musculus 0 207
ENSMUST00000154389 Hdac11-003 retained_intron Mus_musculus 0 207
ENSMUST00000127768 Hdac11-004 retained_intron Mus_musculus 0 191

Loading