C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone deacetylase 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041736 Hdac11-001 ENSMUSG00000034245 10090 + 6:91156665-91174692 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041736
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041736 5.919±3.70 4.878±1.53 9.774±0.39 27.277±5.96 11.433±5.35 11.774±2.60 8.880±0.44 13.944±1.35 16.734±9.84 7.841±0.96 3.755±0.43 15.027±4.73 0.860±0.55 55.426±24.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000518 CIL_000518_0002 CGP 6:91013068-91174692
CIL_0004U8 CIL_0004U8_0003 CGP 6:91156665-91272540

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 TAS histone deacetylase complex
GO:0004407 TAS histone deacetylase activity
GO:0005515 IPI protein binding
GO:0005634 TAS nucleus
GO:0005737 TAS cytoplasm
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008134 TAS transcription factor binding
GO:0014003 IEA oligodendrocyte development
GO:0016568 TAS chromatin modification
GO:0016575 IEA histone deacetylation
GO:0032041 IEA NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0046969 IEA NAD-dependent histone deacetylase activity (H3-K9 specific)
GO:0046970 IEA NAD-dependent histone deacetylase activity (H4-K16 specific)
GO:0070062 IEA extracellular vesicular exosome
GO:0070932 IEA histone H3 deacetylation
GO:0070933 IEA histone H4 deacetylation
GO:0097372 IEA NAD-dependent histone deacetylase activity (H3-K18 specific)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295757 HDAC11-001 protein_coding Homo_sapiens 0 1230
ENST00000402259 HDAC11-004 protein_coding Homo_sapiens 0 374
ENST00000402271 HDAC11-005 protein_coding Homo_sapiens 0 571
ENST00000404040 HDAC11-007 protein_coding Homo_sapiens 0 494
ENST00000404548 HDAC11-008 protein_coding Homo_sapiens 0 350
ENST00000405025 HDAC11-009 protein_coding Homo_sapiens 0 333
ENST00000405478 HDAC11-010 protein_coding Homo_sapiens 0 907
ENST00000416248 HDAC11-014 protein_coding Homo_sapiens 0 470
ENST00000418189 HDAC11-012 protein_coding Homo_sapiens 0 351
ENST00000425430 HDAC11-006 nonsense_mediated_decay Homo_sapiens 0 568
ENST00000433119 HDAC11-002 protein_coding Homo_sapiens 0 669
ENST00000434848 HDAC11-013 protein_coding Homo_sapiens 0 333
ENST00000437379 HDAC11-017 protein_coding Homo_sapiens 0 1205
ENST00000446613 HDAC11-201 protein_coding Homo_sapiens 0 669
ENST00000455904 HDAC11-015 protein_coding Homo_sapiens 0 767
ENST00000458642 HDAC11-011 protein_coding Homo_sapiens 0 660
ENST00000475818 HDAC11-003 retained_intron Homo_sapiens 0 717
ENST00000487585 HDAC11-016 retained_intron Homo_sapiens 0 309
ENST00000495099 HDAC11-018 processed_transcript Homo_sapiens 4.00001e-40 167
ENST00000498532 HDAC11-019 retained_intron Homo_sapiens 0 547
ENST00000522202 HDAC11-020 protein_coding Homo_sapiens 0 798

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