C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tweety family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425969 TTYH1-008 ENSG00000167614 9606 + 19:54415510-54426768 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000425969
Transcript ID Colon
ENST00000425969 3.174±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005M5 CIL_0005M5_0001 CGP 19:54351384-54436900
CIL_0005M4 CIL_0005M4_0001 CGP 19:54415219-54462037

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005254 IEA chloride channel activity
GO:0034707 IEA chloride channel complex
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153673 Ttyh1-015 nonsense_mediated_decay Mus_musculus 0 728
ENSMUST00000079415 Ttyh1-002 protein_coding Mus_musculus 0 390
ENSMUST00000129423 Ttyh1-001 protein_coding Mus_musculus 0 390
ENSMUST00000119661 Ttyh1-005 protein_coding Mus_musculus 0 390
ENSMUST00000126971 Ttyh1-006 retained_intron Mus_musculus 0 390
ENSMUST00000148760 Ttyh1-008 processed_transcript Mus_musculus 0 388
ENSMUST00000130150 Ttyh1-003 processed_transcript Mus_musculus 0 281
ENSMUST00000151959 Ttyh1-009 processed_transcript Mus_musculus 0 200
ENSMUST00000134536 Ttyh1-004 retained_intron Mus_musculus 0 198
ENSMUST00000032594 Ttyh1-007 nonsense_mediated_decay Mus_musculus 9e-37 158

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