C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 75
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427960 WDR75-002 ENSG00000115368 9606 + 2:189441482-189475552 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverOvaryENST00000427960
Transcript ID Brain Breast Colon Kidney Liver Ovary
ENST00000427960 0.703±0.00 0.926±0.00 0.335±0.00 0.639±0.00 0.828±0.00 2.291±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Q1 CIL_0000Q1_0001 CGP 2:189031896-189475565

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027139 Wdr75-001 protein_coding Mus_musculus 0 2392
ENSMUST00000143737 Wdr75-003 processed_transcript Mus_musculus 0 1700
ENSMUST00000154436 Wdr75-002 retained_intron Mus_musculus 0 1648
ENSMUST00000135662 Wdr75-004 retained_intron Mus_musculus 0 926
ENSMUST00000186308 Wdr75-008 retained_intron Mus_musculus 0 451
ENSMUST00000157025 Ctr9-003 retained_intron Mus_musculus 0.0003 53
ENSMUST00000152019 Ctr9-002 retained_intron Mus_musculus 0.0003 53

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