C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000Q1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204262-ENSG00000115368 CGP 9606 2:189031896-189475565
GeneTranscriptPositionBiotype
ENSG00000115368 (WDR75)
WD repeat domain 75 		ENST00000314761 (WDR75-001) 189441433-189475565 protein_coding
ENST00000427960 (WDR75-002) 189441482-189475552 nonsense_mediated_decay
ENST00000436347 (WDR75-003) 189441446-189475546 nonsense_mediated_decay
ENST00000472286 (WDR75-005) 189441462-189455621 retained_intron
ENST00000475596 (WDR75-004) 189441468-189452049 retained_intron
ENST00000498365 (WDR75-006) 189462484-189464211 retained_intron
ENSG00000204262 (COL5A2)
collagen, type V, alpha 2 		ENST00000374866 (COL5A2-001) 189031896-189179879 protein_coding
ENST00000470524 (COL5A2-002) 189056766-189063038 retained_intron
ENST00000618828 (COL5A2-201) 189031915-189179879 protein_coding
ENSG00000213601 (KRT18P19)
keratin 18 pseudogene 19 		ENST00000395181 (KRT18P19-001) 189311263-189311967 processed_pseudogene
ENSG00000228073 (AC133106.2)
 ENST00000419029 (AC133106.2-001) 189095063-189096158 antisense
CIL_0000Q1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026042-ENSMUSG00000025995 CGP 10090 1:45374321-45823619
GeneTranscriptPositionBiotype
ENSMUSG00000025995 (Wdr75)
WD repeat domain 75 		ENSMUST00000027139 (Wdr75-001) 45795166-45823619 protein_coding
ENSMUST00000135662 (Wdr75-004) 45814678-45823619 retained_intron
ENSMUST00000142145 (Wdr75-005) 45795503-45802355 retained_intron
ENSMUST00000143737 (Wdr75-003) 45801989-45823515 processed_transcript
ENSMUST00000146602 (Wdr75-007) 45803686-45805447 processed_transcript
ENSMUST00000147308 (Wdr75-006) 45795507-45803929 protein_coding
ENSMUST00000154436 (Wdr75-002) 45795449-45823604 retained_intron
ENSMUST00000186308 (Wdr75-008) 45822265-45823513 retained_intron
ENSMUST00000186651 (Wdr75-009) 45822558-45823616 protein_coding
ENSMUSG00000026042 (Col5a2)
collagen, type V, alpha 2 		ENSMUST00000086430 (Col5a2-001) 45374321-45503282 protein_coding
ENSMUST00000131535 (Col5a2-004) 45417474-45422411 retained_intron
ENSMUST00000134681 (Col5a2-002) 45414199-45503282 retained_intron
ENSMUST00000150143 (Col5a2-003) 45389031-45393634 retained_intron
ENSMUSG00000095121 (Gm23216)
predicted gene, 23216 		ENSMUST00000179545 (Gm23216-201) 45685456-45685562 snRNA
ENSMUSG00000100218 (RP23-304F24.1)
predicted gene 8296 		ENSMUST00000185597 (RP23-304F24.1-001) 45513532-45514055 processed_pseudogene
ENSMUSG00000100361 (RP23-304F24.2)
predicted gene 7063 		ENSMUST00000186840 (RP23-304F24.2-001) 45519774-45520754 processed_pseudogene
ENSMUSG00000100843 (RP24-350F5.1)
predicted gene 8307 		ENSMUST00000187682 (RP24-350F5.1-001) 45768337-45769486 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Q1_0001ENSG00000115368ENST00000314761ENST00000427960ENST00000436347ENST00000472286ENST00000475596ENST00000498365ENSG00000204262ENST00000374866ENST00000470524ENST00000618828ENSG00000213601ENST00000395181ENSG00000228073ENST00000419029CIL_0000Q1_0002ENSMUSG00000025995ENSMUST00000027139ENSMUST00000135662ENSMUST00000142145ENSMUST00000143737ENSMUST00000146602ENSMUST00000147308ENSMUST00000154436ENSMUST00000186308ENSMUST00000186651ENSMUSG00000026042ENSMUST00000086430ENSMUST00000131535ENSMUST00000134681ENSMUST00000150143ENSMUSG00000095121ENSMUST00000179545ENSMUSG00000100218ENSMUST00000185597ENSMUSG00000100361ENSMUST00000186840ENSMUSG00000100843ENSMUST00000187682
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Q1_0001ENSG00000115368ENST00000314761ENST00000427960ENST00000436347ENSG00000204262ENST00000374866ENST00000618828ENSG00000213601ENST00000395181ENSG00000228073ENST00000419029CIL_0000Q1_0002ENSMUSG00000025995ENSMUST00000027139ENSMUST00000135662ENSMUST00000142145ENSMUST00000143737ENSMUST00000147308ENSMUST00000154436ENSMUST00000186308ENSMUST00000186651ENSMUSG00000026042ENSMUST00000086430ENSMUSG00000095121ENSMUST00000179545ENSMUSG00000100218ENSMUST00000185597ENSMUSG00000100361ENSMUST00000186840ENSMUSG00000100843ENSMUST00000187682
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115368 ENST00000314761 6.179±0.00 7.960±0.00 0.925±0.00 3.590±0.23 3.859±0.43 3.933±1.92 1.873±0.34 4.914±2.02 2.587±0.76 1.537±0.30 2.409±1.70 13.653±9.50 5.563±1.67 11.768±1.38
ENST00000427960 N/A N/A N/A 0.703±0.00 0.926±0.00 0.335±0.00 N/A 0.639±0.00 0.828±0.00 N/A N/A 2.291±1.40 N/A N/A
ENST00000436347 N/A N/A N/A N/A N/A N/A N/A N/A 1.007±0.00 2.079±0.00 N/A N/A N/A N/A
ENST00000472286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000204262 ENST00000374866 10.323±0.00 3.680±0.00 0.527±0.00 0.980±0.17 18.175±5.97 2.393±1.64 2.282±1.19 2.735±0.42 5.045±3.89 3.784±2.37 0.206±0.00 6.055±3.36 10.585±4.66 3.239±0.00
ENST00000470524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618828 N/A 0.987±0.00 N/A 0.574±0.00 N/A N/A N/A N/A 0.341±0.00 1.927±0.00 0.228±0.00 15.474±0.00 36.950±0.00 2.442±0.00
ENSG00000213601 ENST00000395181 N/A N/A 0.340±0.00 N/A N/A 0.477±0.00 0.076±0.05 N/A 0.024±0.00 N/A N/A 0.073±0.00 N/A 0.031±0.01
ENSG00000228073 ENST00000419029 N/A 0.030±0.00 N/A N/A N/A 0.691±0.00 0.344±0.00 N/A 0.183±0.00 N/A N/A 0.231±0.02 N/A 0.152±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025995 ENSMUST00000027139 5.340±1.17 1.319±0.02 5.026±3.41 2.459±0.93 2.489±0.79 2.053±0.49 1.653±0.33 2.293±0.29 6.004±5.42 2.506±0.54 3.435±0.51 3.001±1.38 7.488±4.00 4.095±1.88
ENSMUST00000135662 N/A N/A N/A 2.572±0.50 N/A N/A N/A N/A 1.140±0.06 N/A N/A 2.692±0.00 N/A N/A
ENSMUST00000142145 N/A N/A N/A N/A 5.644±0.00 N/A N/A N/A N/A N/A N/A 10.789±0.00 N/A N/A
ENSMUST00000143737 N/A N/A N/A 1.659±0.00 N/A N/A N/A N/A N/A N/A N/A 2.637±0.00 4.205±3.10 1.715±0.00
ENSMUST00000146602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147308 20.208±6.47 21.280±2.73 N/A N/A 24.731±2.31 16.242±0.98 9.587±0.91 10.894±2.33 7.064±0.54 17.614±1.07 N/A 32.887±8.33 N/A 8.468±2.73
ENSMUST00000154436 2.200±0.98 1.306±0.47 1.740±0.25 2.476±1.29 1.610±0.18 0.853±0.13 0.515±0.19 0.548±0.09 1.355±0.86 1.305±0.15 N/A 2.175±0.64 1.426±0.44 0.727±0.18
ENSMUST00000186308 N/A N/A N/A 3.611±0.00 N/A N/A N/A N/A N/A N/A N/A 8.571±0.00 10.906±6.21 9.908±0.00
ENSMUST00000186651 N/A N/A N/A 8.158±0.00 N/A N/A N/A N/A N/A N/A N/A 31.940±0.00 42.093±16.27 10.668±0.00
ENSMUSG00000026042 ENSMUST00000086430 22.752±1.15 1.624±0.42 21.908±2.12 4.429±2.88 18.002±4.31 9.133±2.35 4.432±0.45 3.649±0.28 1.907±1.52 8.971±1.07 2.841±0.45 9.661±2.48 11.971±6.06 0.555±0.23
ENSMUST00000131535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000095121 ENSMUST00000179545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 66.887±0.00 N/A
ENSMUSG00000100218 ENSMUST00000185597 N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000100361 ENSMUST00000186840 0.044±0.00 N/A 0.037±0.00 N/A 0.121±0.00 N/A N/A 0.081±0.03 0.010±0.00 N/A N/A 0.044±0.00 0.015±0.00 N/A
ENSMUSG00000100843 ENSMUST00000187682 0.114±0.03 N/A N/A 0.007±0.00 0.083±0.00 0.122±0.08 N/A N/A N/A 0.041±0.01 N/A 0.252±0.00 0.046±0.04 N/A

Loading