C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alkB, alkylation repair homolog 2 (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429722 ALKBH2-007 ENSG00000189046 9606 - 12:109088197-109093459 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000429722
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000429722 2.046±0.00 1.806±0.00 2.810±0.01 1.163±0.64 2.112±1.13 1.332±0.00 1.817±0.00 3.887±2.32 1.835±0.00 1.433±0.63 4.474±1.70 1.851±0.59 3.977±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VU CIL_0001VU_0001 CGP 12:109023089-109093631
CIL_0001VT CIL_0001VT_0001 CGP 12:109088188-109110992

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005654 TAS nucleoplasm
GO:0006281 TAS DNA repair
GO:0006307 IDA DNA dealkylation involved in DNA repair
GO:0008198 IDA ferrous iron binding
GO:0016491 IEA oxidoreductase activity
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0035511 IDA oxidative DNA demethylation
GO:0043734 IDA DNA-N1-methyladenine dioxygenase activity
GO:0051747 IDA cytosine C-5 DNA demethylase activity
GO:0055114 IEA oxidation-reduction process
GO:0070989 TAS oxidative demethylation
GO:0080111 TAS DNA demethylation

Homologs

No Homologs available.

Loading