C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430315 RP11-305L7.5-001 ENSG00000230147 9606 - 9:91169585-91170045 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartOvaryTestisENST00000430315
Transcript ID Bladder Breast Heart Ovary Testis
ENST00000430315 0.164±0.00 0.059±0.00 0.122±0.10 0.128±0.04 0.134±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JN CIL_0002JN_0001 CGP 9:90801787-91361913

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 479
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 455
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 455
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 436
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 422
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 416
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 409
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 2e-32 143
ENSMUST00000188671 RP23-325F17.2-001 processed_pseudogene Mus_musculus 1e-28 130

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