C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | opsin 1 (cone pigments), medium-wave-sensitive 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000430419  |
OPN1MW2-002 |
ENSG00000166160 |
9606 | + |
X:154227196-154233277  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007GD | CIL_0007GD_0004 | CGP | X:154182596-154233286 |
| CIL_0007GD | CIL_0007GD_0003 | CGP | X:154219756-154271805 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004930 | IEA | G-protein coupled receptor activity |
| GO:0007186 | IEA | G-protein coupled receptor signaling pathway |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000127445
|
Opn1mw-006 | protein_coding | Mus_musculus | 0 | 645 |
|
ENSMUST00000101457
|
Opn1mw-002 | protein_coding | Mus_musculus | 0 | 510 |
|
ENSMUST00000033771
|
Opn1mw-001 | protein_coding | Mus_musculus | 0 | 510 |
|
ENSMUST00000145443
|
Opn1mw-004 | processed_transcript | Mus_musculus | 0 | 296 |
|
ENSMUST00000123401
|
Opn1mw-005 | processed_transcript | Mus_musculus | 0 | 226 |
|
ENSMUST00000135307
|
Opn1mw-003 | processed_transcript | Mus_musculus | 0 | 226 |
