C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alanyl-tRNA synthetase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430739 AARSD1-013 ENSG00000266967 9606 - 17:42955901-42964498 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyLiverLungOvaryPlacentaTestisENST00000430739
Transcript ID Bladder Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000430739 0.609±0.00 2.079±0.00 1.148±0.00 3.690±0.74 6.558±0.00 56.076±0.00 6.679±0.00 70.308±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000447 CIL_000447_0001 CGP 17:42900797-42980528
CIL_00063V CIL_00063V_0001 CGP 17:42950526-42980528

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0016876 IEA ligase activity, forming aminoacyl-tRNA and related compounds
GO:0043039 IEA tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070395 Aarsd1-003 protein_coding Mus_musculus 0 824
ENSMUST00000107259 Gm27029-001 protein_coding Mus_musculus 0 821
ENSMUST00000107257 Gm27029-002 protein_coding Mus_musculus 0 821
ENSMUST00000133240 Aarsd1-009 processed_transcript Mus_musculus 0 568
ENSMUST00000140123 Aarsd1-011 retained_intron Mus_musculus 0 392
ENSMUST00000189049 Aarsd1-012 retained_intron Mus_musculus 3.00018e-42 176

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