C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432573 CTA-313A17.3-001 ENSG00000228546 9606 + 7:102337316-102339115 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000432573
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000432573 1.344±0.00 3.562±0.00 0.979±0.00 2.028±0.37 2.652±1.63 0.923±0.00 1.211±0.00 1.751±0.79 1.368±0.00 0.949±0.00 0.379±0.12 1.557±0.39 1.755±0.85 2.959±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110709 Pms2-014 protein_coding Mus_musculus 0 425
ENSMUST00000126331 Pms2-004 retained_intron Mus_musculus 0 425
ENSMUST00000147910 Pms2-009 processed_transcript Mus_musculus 0 425
ENSMUST00000110707 Pms2-005 processed_transcript Mus_musculus 0 425
ENSMUST00000110710 Pms2-002 processed_transcript Mus_musculus 0 425
ENSMUST00000141942 Pms2-007 retained_intron Mus_musculus 0 425
ENSMUST00000170083 Pms2-003 processed_transcript Mus_musculus 0 425
ENSMUST00000148011 Pms2-001 protein_coding Mus_musculus 0 425
ENSMUST00000168085 Pms2-012 processed_transcript Mus_musculus 0 390
ENSMUST00000128207 Pms2-010 retained_intron Mus_musculus 0 268
ENSMUST00000154781 Pms2-006 retained_intron Mus_musculus 0 268
ENSMUST00000128153 Pms2-008 processed_transcript Mus_musculus 6e-16 88

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