C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: postmeiotic segregation increased 2 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110707 Pms2-005 ENSMUSG00000079109 10090 + 5:143909990-143931442 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000110707
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000110707 1.047±0.52 0.513±0.18 0.939±0.03 1.961±0.28 0.931±0.31 0.957±0.25 0.443±0.01 0.907±0.28 1.688±1.44 1.410±0.17 0.542±0.19 1.581±0.53 3.036±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AY CIL_0005AY_0002 CGP 5:143909964-143985719

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265849 PMS2-001 protein_coding Homo_sapiens 0 1280
ENST00000275546 CH17-264B6.3-001 unprocessed_pseudogene Homo_sapiens 0 556
ENST00000333674 RP11-313P13.4-001 unprocessed_pseudogene Homo_sapiens 0 532
ENST00000380410 CH17-264B6.4-001 unprocessed_pseudogene Homo_sapiens 0 556
ENST00000380416 PMS2-007 retained_intron Homo_sapiens 0 592
ENST00000382321 PMS2-006 protein_coding Homo_sapiens 0 883
ENST00000394921 PMS2P3-003 processed_transcript Homo_sapiens 0 278
ENST00000398065 PMS2P5-001 unprocessed_pseudogene Homo_sapiens 0 579
ENST00000406569 PMS2-005 processed_transcript Homo_sapiens 0 1280
ENST00000412466 PMS2P4-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 549
ENST00000412694 PMS2P6-001 unprocessed_pseudogene Homo_sapiens 0 523
ENST00000414507 PMS2P4-002 processed_transcript Homo_sapiens 0 272
ENST00000415839 PMS2-002 retained_intron Homo_sapiens 0 272
ENST00000418756 PMS2P3-002 processed_transcript Homo_sapiens 0 532
ENST00000422064 PMS2P3-005 processed_transcript Homo_sapiens 0 278
ENST00000425039 PMS2L2-001 unprocessed_pseudogene Homo_sapiens 0 523
ENST00000430602 PMS2P3-004 processed_transcript Homo_sapiens 0 532
ENST00000431037 PMS2P1-001 unprocessed_pseudogene Homo_sapiens 0 416
ENST00000432573 CTA-313A17.3-001 unprocessed_pseudogene Homo_sapiens 0 425
ENST00000437568 PMS2P3-001 processed_transcript Homo_sapiens 0 278
ENST00000441237 PMS2P9-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 540
ENST00000441476 PMS2-201 protein_coding Homo_sapiens 0 857
ENST00000447708 PMS2P10-001 unprocessed_pseudogene Homo_sapiens 0 556
ENST00000451831 PMS2P11-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 551
ENST00000506558 RP11-313P13.3-001 unprocessed_pseudogene Homo_sapiens 0 553
ENST00000529061 PMS2P3-009 transcribed_unprocessed_pseudogene Homo_sapiens 0 532
ENST00000533167 PMS2P3-008 processed_transcript Homo_sapiens 0 278

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