C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433306 RP11-629O4.1-001 ENSG00000176812 9606 - X:25194381-25195207 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonENST00000433306
Transcript ID Adipose Adrenal Colon
ENST00000433306 0.020±0.00 0.022±0.00 0.084±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NM CIL_0008NM_0001 VISTA X:24597265-25200155
CIL_0008W8 CIL_0008W8_0001 VISTA X:24627531-25229450
CIL_0008W7 CIL_0008W7_0001 VISTA X:24689762-25291464
CIL_0008W6 CIL_0008W6_0001 VISTA X:24698950-25300639
CIL_0009CI CIL_0009CI_0001 VISTA X:24700754-25302415
CIL_0007PA CIL_0007PA_0001 UCNEbase X:24805232-25650665
CIL_0008W5 CIL_0008W5_0001 VISTA X:25082107-25684217

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006915 Mettl1-001 protein_coding Mus_musculus 0 782
ENSMUST00000120542 Mettl1-002 protein_coding Mus_musculus 0 549
ENSMUST00000139486 Mettl1-004 nonsense_mediated_decay Mus_musculus 0 294
ENSMUST00000135655 Mettl1-003 retained_intron Mus_musculus 0 294
ENSMUST00000152960 Mettl1-005 protein_coding Mus_musculus 8e-33 145

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