C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleotide binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433392 NUBP1-003 ENSG00000103274 9606 + 16:10743855-10769351 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074Y CIL_00074Y_0001 CGP 16:10627501-10769351
CIL_00074Z CIL_00074Z_0001 CGP 16:10743786-10818794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 TAS nucleotide binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006879 IMP cellular iron ion homeostasis
GO:0016049 IMP cell growth
GO:0016226 IMP iron-sulfur cluster assembly
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0051536 IDA iron-sulfur cluster binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023146 Nubp1-001 protein_coding Mus_musculus 0 641
ENSMUST00000156338 Nubp1-006 retained_intron Mus_musculus 0 292
ENSMUST00000142771 Nubp1-002 retained_intron Mus_musculus 3e-29 134
ENSMUST00000129280 Nubp1-003 retained_intron Mus_musculus 1e-27 128

Loading