C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleotide binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023146 Nubp1-001 ENSMUSG00000022503 10090 + 16:10411948-10424428 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023146
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023146 6.819±2.00 4.079±1.21 6.773±2.53 10.650±0.82 4.898±1.23 7.662±1.77 1.902±0.61 5.365±0.50 8.450±3.78 5.138±1.62 1.815±0.31 6.499±2.19 9.062±3.68 4.481±1.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074Y CIL_00074Y_0002 CGP 16:10357948-10424428
CIL_00074Z CIL_00074Z_0002 CGP 16:10411948-10447362

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005829 ISS cytosol
GO:0005886 IEA plasma membrane
GO:0006879 IEA cellular iron ion homeostasis
GO:0010826 IMP negative regulation of centrosome duplication
GO:0016049 IEA cell growth
GO:0016226 ISS iron-sulfur cluster assembly
GO:0046872 IEA metal ion binding
GO:0051536 ISS iron-sulfur cluster binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0051642 IMP centrosome localization
GO:0070062 IEA extracellular vesicular exosome
GO:0072697 IMP protein localization to cell cortex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283027 NUBP1-001 protein_coding Homo_sapiens 0 1022
ENST00000433392 NUBP1-003 protein_coding Homo_sapiens 0 641
ENST00000571790 NUBP1-004 processed_transcript Homo_sapiens 0 883
ENST00000574334 NUBP1-005 protein_coding Homo_sapiens 0 311

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