C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleotide binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103274 NUBP1 9606 + 16:10743786-10769351 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000283027 NUBP1-001 10743845-10769351 protein_coding
  ENST00000433392 NUBP1-003 10743855-10769351 protein_coding
  ENST00000571175 NUBP1-006 10757873-10769351 protein_coding
  ENST00000571790 NUBP1-004 10743841-10763834 processed_transcript
  ENST00000573663 NUBP1-008 10765024-10769313 processed_transcript
  ENST00000574137 NUBP1-002 10743844-10762112 retained_intron
  ENST00000574334 NUBP1-005 10743786-10757994 protein_coding
  ENST00000574691 NUBP1-007 10758011-10769351 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000283027ENST00000571790ENST00000574137ENST00000574334
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000283027 3.585±0.00 9.633±0.00 0.293±0.00 1.144±0.00 3.728±0.20 4.306±1.77 4.046±2.90 2.400±0.00 2.490±1.78 2.920±0.81 4.360±0.76 5.999±4.35 14.197±4.61 5.315±0.35
ENST00000571790 N/A N/A 0.694±0.00 N/A N/A N/A N/A N/A 1.692±0.00 N/A N/A 5.197±3.67 N/A N/A
ENST00000574137 2.904±0.00 N/A N/A N/A N/A N/A 6.966±0.00 N/A N/A 5.507±0.00 N/A N/A N/A 6.943±0.00
ENST00000574334 7.033±0.00 23.231±0.00 N/A 6.044±0.00 8.128±0.00 7.743±0.00 2.422±0.00 4.656±0.00 2.328±0.00 N/A 6.185±0.00 11.834±0.00 29.990±0.00 13.758±2.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074Y CIL_00074Y_0001 CGP 16:10627501-10769351
CIL_00074Z CIL_00074Z_0001 CGP 16:10743786-10818794

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 TAS nucleotide binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006879 IMP cellular iron ion homeostasis
GO:0010826 IEA negative regulation of centrosome duplication
GO:0016049 IMP cell growth
GO:0016226 IMP iron-sulfur cluster assembly
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0051536 IDA iron-sulfur cluster binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0051642 IEA centrosome localization
GO:0070062 IDA extracellular vesicular exosome
GO:0072697 IEA protein localization to cell cortex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055472 nubp1 nucleotide binding protein 1 (MinD homolog, E. coli) protein_coding Danio_rerio
ENSMUSG00000022503 Nubp1 nucleotide binding protein 1 protein_coding Mus_musculus

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