C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00074Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153060-ENSG00000103274 CGP 9606 16:10627501-10769351
GeneTranscriptPositionBiotype
ENSG00000103274 (NUBP1)
nucleotide binding protein 1 		ENST00000283027 (NUBP1-001) 10743845-10769351 protein_coding
ENST00000433392 (NUBP1-003) 10743855-10769351 protein_coding
ENST00000571175 (NUBP1-006) 10757873-10769351 protein_coding
ENST00000571790 (NUBP1-004) 10743841-10763834 processed_transcript
ENST00000573663 (NUBP1-008) 10765024-10769313 processed_transcript
ENST00000574137 (NUBP1-002) 10743844-10762112 retained_intron
ENST00000574334 (NUBP1-005) 10743786-10757994 protein_coding
ENST00000574691 (NUBP1-007) 10758011-10769351 protein_coding
ENSG00000153060 (TEKT5)
tektin 5 		ENST00000283025 (TEKT5-001) 10627501-10694945 protein_coding
ENST00000574923 (TEKT5-002) 10627501-10671778 processed_transcript
ENST00000576638 (TEKT5-003) 10635764-10690119 protein_coding
ENSG00000261904 (RP11-109M19.3)
 ENST00000571250 (RP11-109M19.3-001) 10720015-10721464 unprocessed_pseudogene
ENSG00000262107 (RP11-109M19.5)
 ENST00000571794 (RP11-109M19.5-001) 10719833-10720015 unprocessed_pseudogene
ENSG00000262158 (CTD-2318B16.2)
 ENST00000572729 (CTD-2318B16.2-001) 10723836-10724617 unprocessed_pseudogene
ENSG00000262322 (RP11-109M19.2)
 ENST00000572715 (RP11-109M19.2-001) 10721698-10723068 unprocessed_pseudogene
ENSG00000262381 (CTD-2318B16.1)
 ENST00000576835 (CTD-2318B16.1-001) 10724620-10725296 unprocessed_pseudogene
ENSG00000263196 (CTD-2318B16.3)
 ENST00000574391 (CTD-2318B16.3-001) 10723424-10723766 unprocessed_pseudogene
ENSG00000263241 (RP11-109M19.4)
 ENST00000575007 (RP11-109M19.4-001) 10718633-10719762 unprocessed_pseudogene
ENSG00000263279 (RP11-109M19.1)
 ENST00000576710 (RP11-109M19.1-001) 10691273-10692973 antisense
CIL_00074Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039179-ENSMUSG00000022503 CGP 10090 16:10357948-10424428
GeneTranscriptPositionBiotype
ENSMUSG00000022503 (Nubp1)
nucleotide binding protein 1 		ENSMUST00000023146 (Nubp1-001) 10411948-10424428 protein_coding
ENSMUST00000129280 (Nubp1-003) 10411954-10420551 retained_intron
ENSMUST00000140157 (Nubp1-005) 10411949-10421672 processed_transcript
ENSMUST00000142771 (Nubp1-002) 10411970-10424428 retained_intron
ENSMUST00000143617 (Nubp1-004) 10421236-10423346 processed_transcript
ENSMUST00000156338 (Nubp1-006) 10412064-10421437 retained_intron
ENSMUSG00000039179 (Tekt5)
tektin 5 		ENSMUST00000043415 (Tekt5-001) 10357948-10395490 protein_coding
ENSMUST00000115831 (Tekt5-002) 10361254-10395448 protein_coding
ENSMUSG00000050908 (Tvp23a)
trans-golgi network vesicle protein 23A 		ENSMUST00000051118 (Tvp23a-001) 10420557-10447362 protein_coding
ENSMUST00000128288 (Tvp23a-003) 10423244-10447144 nonsense_mediated_decay
ENSMUST00000135315 (Tvp23a-005) 10425863-10429185 processed_transcript
ENSMUST00000141587 (Tvp23a-004) 10427039-10429261 processed_transcript
ENSMUST00000153027 (Tvp23a-002) 10424211-10447327 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074Y_0001ENSG00000103274ENST00000283027ENST00000433392ENST00000571175ENST00000571790ENST00000573663ENST00000574137ENST00000574334ENST00000574691ENSG00000153060ENST00000283025ENST00000574923ENST00000576638ENSG00000261904ENST00000571250ENSG00000262107ENST00000571794ENSG00000262158ENST00000572729ENSG00000262322ENST00000572715ENSG00000262381ENST00000576835ENSG00000263196ENST00000574391ENSG00000263241ENST00000575007ENSG00000263279ENST00000576710CIL_00074Y_0002ENSMUSG00000022503ENSMUST00000023146ENSMUST00000129280ENSMUST00000140157ENSMUST00000142771ENSMUST00000143617ENSMUST00000156338ENSMUSG00000039179ENSMUST00000043415ENSMUST00000115831ENSMUSG00000050908ENSMUST00000051118ENSMUST00000128288ENSMUST00000135315ENSMUST00000141587ENSMUST00000153027
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074Y_0001ENSG00000103274ENST00000283027ENST00000571790ENST00000574137ENST00000574334ENSG00000153060ENST00000283025ENST00000574923ENST00000576638ENSG00000261904ENST00000571250ENSG00000262107ENST00000571794ENSG00000262158ENST00000572729ENSG00000262322ENST00000572715ENSG00000262381ENST00000576835ENSG00000263196ENST00000574391ENSG00000263241ENST00000575007ENSG00000263279ENST00000576710CIL_00074Y_0002ENSMUSG00000022503ENSMUST00000023146ENSMUST00000129280ENSMUST00000142771ENSMUSG00000039179ENSMUST00000043415ENSMUST00000115831ENSMUSG00000050908ENSMUST00000051118
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103274 ENST00000283027 3.585±0.00 9.633±0.00 0.293±0.00 1.144±0.00 3.728±0.20 4.306±1.77 4.046±2.90 2.400±0.00 2.490±1.78 2.920±0.81 4.360±0.76 5.999±4.35 14.197±4.61 5.315±0.35
ENST00000433392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571790 N/A N/A 0.694±0.00 N/A N/A N/A N/A N/A 1.692±0.00 N/A N/A 5.197±3.67 N/A N/A
ENST00000573663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574137 2.904±0.00 N/A N/A N/A N/A N/A 6.966±0.00 N/A N/A 5.507±0.00 N/A N/A N/A 6.943±0.00
ENST00000574334 7.033±0.00 23.231±0.00 N/A 6.044±0.00 8.128±0.00 7.743±0.00 2.422±0.00 4.656±0.00 2.328±0.00 N/A 6.185±0.00 11.834±0.00 29.990±0.00 13.758±2.61
ENST00000574691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153060 ENST00000283025 N/A 0.079±0.00 N/A 0.038±0.01 N/A N/A 0.028±0.00 0.381±0.00 N/A N/A N/A 0.080±0.00 0.083±0.00 13.125±3.39
ENST00000574923 N/A 0.316±0.00 N/A N/A 0.065±0.00 N/A N/A N/A 0.161±0.00 N/A N/A 0.126±0.00 N/A N/A
ENST00000576638 0.024±0.00 0.058±0.00 N/A 0.235±0.00 N/A 0.299±0.00 N/A N/A 0.130±0.06 N/A N/A 0.147±0.02 N/A 2.593±0.00
ENSG00000261904 ENST00000571250 N/A N/A N/A 0.040±0.00 N/A N/A 0.007±0.00 N/A N/A N/A N/A N/A N/A 0.237±0.17
ENSG00000262107 ENST00000571794 N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00
ENSG00000262158 ENST00000572729 N/A N/A N/A N/A 0.016±0.00 N/A 0.073±0.00 N/A 0.013±0.00 0.013±0.00 0.014±0.00 N/A N/A 0.580±0.51
ENSG00000262322 ENST00000572715 0.008±0.00 N/A N/A 0.024±0.00 N/A 0.353±0.00 N/A 0.455±0.00 N/A 0.288±0.00 N/A N/A N/A 0.736±0.68
ENSG00000262381 ENST00000576835 N/A N/A N/A 0.016±0.00 N/A 0.202±0.00 N/A N/A N/A N/A N/A N/A N/A 1.305±1.16
ENSG00000263196 ENST00000574391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.847±0.69
ENSG00000263241 ENST00000575007 N/A N/A N/A 0.054±0.00 0.651±0.00 N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A 0.628±0.59
ENSG00000263279 ENST00000576710 N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A 0.180±0.00 N/A N/A N/A N/A 0.965±0.32
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022503 ENSMUST00000023146 6.819±2.00 4.079±1.21 6.773±2.53 10.650±0.82 4.898±1.23 7.662±1.77 1.902±0.61 5.365±0.50 8.450±3.78 5.138±1.62 1.815±0.31 6.499±2.19 9.062±3.68 4.481±1.49
ENSMUST00000129280 N/A 4.388±0.78 N/A N/A N/A 6.985±0.00 N/A N/A 4.822±0.71 N/A N/A 7.348±0.00 9.688±0.00 4.165±0.82
ENSMUST00000140157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142771 1.874±0.00 1.052±0.12 1.530±0.00 N/A 1.305±0.12 1.241±0.00 0.595±0.00 N/A N/A 1.684±0.00 0.490±0.00 1.253±0.00 N/A N/A
ENSMUST00000143617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039179 ENSMUST00000043415 0.152±0.11 0.038±0.01 0.604±0.04 1.623±0.50 0.083±0.06 0.218±0.06 0.070±0.02 0.315±0.08 0.056±0.02 3.602±0.72 N/A 0.366±0.18 0.030±0.01 88.846±4.33
ENSMUST00000115831 0.031±0.00 0.089±0.00 N/A 2.819±0.00 N/A 0.149±0.00 0.008±0.00 N/A N/A N/A 0.023±0.00 0.163±0.05 0.074±0.04 69.077±0.00
ENSMUSG00000050908 ENSMUST00000051118 3.663±1.84 N/A 2.586±1.19 10.898±6.54 N/A 1.992±0.00 0.820±0.02 1.501±0.16 2.009±0.76 2.183±0.00 0.405±0.04 N/A 1.804±0.02 0.677±0.03
ENSMUST00000128288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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