C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caprin family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433722 CAPRIN2-015 ENSG00000110888 9606 - 12:30709553-30735014 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonKidneyLiverMuscleOvaryPlacentaTestisENST00000433722
Transcript ID Adipose Brain Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000433722 1.369±0.00 1.560±0.00 1.247±0.00 0.798±0.00 0.247±0.00 0.438±0.00 1.889±0.00 0.340±0.01 5.011±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HS CIL_0006HS_0001 CGP 12:30628988-30754951

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111569 Caprin2-001 protein_coding Mus_musculus 0 1524
ENSMUST00000072324 Caprin2-003 protein_coding Mus_musculus 0 1042
ENSMUST00000127941 Caprin2-008 processed_transcript Mus_musculus 0 518
ENSMUST00000154971 Caprin2-005 processed_transcript Mus_musculus 0 198

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