C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 68
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434581 TMEM68-002 ENSG00000167904 9606 - 8:55738758-55773354 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000434581
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000434581 1.460±0.00 1.783±0.47 2.362±0.00 1.954±0.00 0.835±0.00 3.660±0.00 0.683±0.00 1.945±0.00 3.238±0.00 1.545±0.41 2.862±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QG CIL_0003QG_0001 CGP 8:55696424-55825448

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016746 IEA transferase activity, transferring acyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029891 Tmem68-001 protein_coding Mus_musculus 0 1282
ENSMUST00000154922 Tmem68-002 nonsense_mediated_decay Mus_musculus 0 649
ENSMUST00000142503 Tmem68-004 retained_intron Mus_musculus 0 427
ENSMUST00000134806 Tmem68-006 retained_intron Mus_musculus 0 274

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