C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | valyl-tRNA synthetase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000435657  |
VARS-001 |
ENSG00000231116 |
9606 | - |
CHR_HSCHR6_MHC_APD_CTG1:31844536-31862971  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0002161 | IEA | aminoacyl-tRNA editing activity |
| GO:0004812 | IEA | aminoacyl-tRNA ligase activity |
| GO:0004832 | IDA:IEA | valine-tRNA ligase activity |
| GO:0005515 | IEA | protein binding |
| GO:0005524 | IEA | ATP binding |
| GO:0005829 | TAS | cytosol |
| GO:0006418 | TAS:IEA | tRNA aminoacylation for protein translation |
| GO:0006438 | IEA | valyl-tRNA aminoacylation |
| GO:0006450 | IEA | regulation of translational fidelity |
| GO:0010467 | TAS | gene expression |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000087315
|
Vars-002 | protein_coding | Mus_musculus | 0 | 4482 |
|
ENSMUST00000173584
|
Vars-001 | protein_coding | Mus_musculus | 0 | 4351 |
|
ENSMUST00000172637
|
Vars-003 | retained_intron | Mus_musculus | 0 | 2486 |
|
ENSMUST00000118387
|
Gm14780-001 | processed_pseudogene | Mus_musculus | 0 | 1105 |
|
ENSMUST00000173336
|
Vars-014 | retained_intron | Mus_musculus | 0 | 588 |
|
ENSMUST00000173911
|
Vars-007 | retained_intron | Mus_musculus | 0 | 431 |
|
ENSMUST00000174084
|
Vars-010 | retained_intron | Mus_musculus | 0 | 309 |
|
ENSMUST00000172999
|
Vars-008 | retained_intron | Mus_musculus | 0 | 268 |
|
ENSMUST00000173302
|
Vars-009 | retained_intron | Mus_musculus | 0 | 217 |
