C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: valyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172637 Vars-003 ENSMUSG00000007029 10090 + 17:35002714-35016322 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000172637
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000172637 4.734±1.39 4.150±0.31 4.368±2.25 7.291±1.58 0.997±0.00 2.520±0.08 6.120±1.60 6.409±0.49 7.360±2.99 2.684±0.71

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000211402 VARS-001 protein_coding Homo_sapiens 0 2486
ENST00000375663 VARS-001 protein_coding Homo_sapiens 0 2486
ENST00000420919 VARS-006 protein_coding Homo_sapiens 0 601
ENST00000422694 VARS-001 protein_coding Homo_sapiens 0 2486
ENST00000424974 VARS-001 protein_coding Homo_sapiens 0 867
ENST00000425144 VARS-001 protein_coding Homo_sapiens 0 2486
ENST00000428445 VARS-006 protein_coding Homo_sapiens 0 601
ENST00000428796 VARS-006 protein_coding Homo_sapiens 0 601
ENST00000435299 VARS-006 protein_coding Homo_sapiens 0 601
ENST00000435657 VARS-001 protein_coding Homo_sapiens 0 2486
ENST00000445152 VARS-006 protein_coding Homo_sapiens 0 601
ENST00000446350 VARS-006 protein_coding Homo_sapiens 0 601
ENST00000457796 VARS-001 protein_coding Homo_sapiens 0 2486
ENST00000459667 VARS-012 retained_intron Homo_sapiens 0 193
ENST00000459794 VARS-011 retained_intron Homo_sapiens 0 411
ENST00000459886 VARS-009 retained_intron Homo_sapiens 0 220
ENST00000460877 VARS-004 retained_intron Homo_sapiens 0 684
ENST00000461227 VARS-013 retained_intron Homo_sapiens 0 409
ENST00000461265 VARS-005 retained_intron Homo_sapiens 0 599
ENST00000461328 VARS-008 retained_intron Homo_sapiens 0 462
ENST00000461732 VARS-003 retained_intron Homo_sapiens 0 1160
ENST00000461874 VARS-009 retained_intron Homo_sapiens 0 220
ENST00000462575 VARS-009 retained_intron Homo_sapiens 0 220
ENST00000462946 VARS-010 processed_transcript Homo_sapiens 0 473
ENST00000463184 VARS-013 retained_intron Homo_sapiens 0 409
ENST00000463326 VARS-008 retained_intron Homo_sapiens 0 462
ENST00000465840 VARS-004 retained_intron Homo_sapiens 0 684
ENST00000466721 VARS-011 retained_intron Homo_sapiens 0 411
ENST00000466837 VARS-011 retained_intron Homo_sapiens 0 411
ENST00000467893 VARS-004 retained_intron Homo_sapiens 0 361
ENST00000469502 VARS-014 processed_transcript Homo_sapiens 6e-31 137
ENST00000469542 VARS-010 processed_transcript Homo_sapiens 0 473
ENST00000470081 VARS-004 retained_intron Homo_sapiens 0 684
ENST00000470953 VARS-014 processed_transcript Homo_sapiens 6e-31 137
ENST00000471313 VARS-012 retained_intron Homo_sapiens 0 193
ENST00000472262 VARS-014 processed_transcript Homo_sapiens 6e-31 137
ENST00000473229 VARS-014 processed_transcript Homo_sapiens 6e-31 137
ENST00000473547 VARS-004 retained_intron Homo_sapiens 0 684
ENST00000473650 VARS-009 retained_intron Homo_sapiens 0 220
ENST00000473729 VARS-005 retained_intron Homo_sapiens 0 599
ENST00000474299 VARS-010 processed_transcript Homo_sapiens 0 473
ENST00000474643 VARS-005 retained_intron Homo_sapiens 0 599
ENST00000476714 VARS-012 retained_intron Homo_sapiens 0 193
ENST00000476915 VARS-008 retained_intron Homo_sapiens 0 462
ENST00000478549 VARS-012 retained_intron Homo_sapiens 0 193
ENST00000478826 VARS-003 retained_intron Homo_sapiens 0 1160
ENST00000479051 VARS-011 retained_intron Homo_sapiens 0 411
ENST00000479323 VARS-013 retained_intron Homo_sapiens 0 409
ENST00000481159 VARS-013 retained_intron Homo_sapiens 0 409
ENST00000482057 VARS-003 retained_intron Homo_sapiens 0 1160
ENST00000482263 VARS-013 retained_intron Homo_sapiens 0 409
ENST00000482300 VARS-011 retained_intron Homo_sapiens 0 411
ENST00000482996 VARS-010 processed_transcript Homo_sapiens 0 473
ENST00000485047 VARS-012 retained_intron Homo_sapiens 0 193
ENST00000486768 VARS-008 retained_intron Homo_sapiens 0 462
ENST00000486789 VARS-009 retained_intron Homo_sapiens 0 220
ENST00000487025 VARS-012 retained_intron Homo_sapiens 0 193
ENST00000487524 VARS-010 processed_transcript Homo_sapiens 0 473
ENST00000488037 VARS-014 processed_transcript Homo_sapiens 6e-31 137
ENST00000488448 VARS-005 retained_intron Homo_sapiens 0 599
ENST00000489089 VARS-008 retained_intron Homo_sapiens 0 462
ENST00000489382 VARS-003 retained_intron Homo_sapiens 0 1160
ENST00000489979 VARS-004 retained_intron Homo_sapiens 0 684
ENST00000490548 VARS-008 retained_intron Homo_sapiens 0 462
ENST00000491232 VARS-010 processed_transcript Homo_sapiens 0 473
ENST00000491744 VARS-003 retained_intron Homo_sapiens 0 710
ENST00000491745 VARS-011 retained_intron Homo_sapiens 0 411
ENST00000494362 VARS-005 retained_intron Homo_sapiens 0 599
ENST00000495010 VARS-003 retained_intron Homo_sapiens 0 1160
ENST00000495637 VARS-005 retained_intron Homo_sapiens 0 599
ENST00000495738 VARS-004 retained_intron Homo_sapiens 0 684
ENST00000496018 VARS-003 retained_intron Homo_sapiens 0 1160
ENST00000497172 VARS-009 retained_intron Homo_sapiens 0 220

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