C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: valyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173336 Vars-014 ENSMUSG00000007029 10090 + 17:35012164-35013082 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENSMUST00000173336
Transcript ID Brain Ovary Testis
ENSMUST00000173336 48.132±0.00 101.982±0.00 189.432±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000211402 VARS-001 protein_coding Homo_sapiens 0 588
ENST00000375663 VARS-001 protein_coding Homo_sapiens 0 588
ENST00000420919 VARS-006 protein_coding Homo_sapiens 0 219
ENST00000422694 VARS-001 protein_coding Homo_sapiens 0 588
ENST00000425144 VARS-001 protein_coding Homo_sapiens 0 588
ENST00000428445 VARS-006 protein_coding Homo_sapiens 0 219
ENST00000428796 VARS-006 protein_coding Homo_sapiens 0 219
ENST00000435299 VARS-006 protein_coding Homo_sapiens 0 219
ENST00000435657 VARS-001 protein_coding Homo_sapiens 0 588
ENST00000445152 VARS-006 protein_coding Homo_sapiens 0 219
ENST00000446350 VARS-006 protein_coding Homo_sapiens 0 219
ENST00000457796 VARS-001 protein_coding Homo_sapiens 0 588
ENST00000459886 VARS-009 retained_intron Homo_sapiens 0 226
ENST00000461265 VARS-005 retained_intron Homo_sapiens 0 520
ENST00000461874 VARS-009 retained_intron Homo_sapiens 0 226
ENST00000462575 VARS-009 retained_intron Homo_sapiens 0 226
ENST00000473650 VARS-009 retained_intron Homo_sapiens 0 226
ENST00000473729 VARS-005 retained_intron Homo_sapiens 0 520
ENST00000474643 VARS-005 retained_intron Homo_sapiens 0 520
ENST00000486789 VARS-009 retained_intron Homo_sapiens 0 226
ENST00000488448 VARS-005 retained_intron Homo_sapiens 0 520
ENST00000494362 VARS-005 retained_intron Homo_sapiens 0 520
ENST00000495637 VARS-005 retained_intron Homo_sapiens 0 520
ENST00000497172 VARS-009 retained_intron Homo_sapiens 0 226

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