C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435753 DDX11-002 ENSG00000013573 9606 + 12:31073876-31104791 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastLiverOvaryPlacentaTestisENST00000435753
Transcript ID Bladder Breast Liver Ovary Placenta Testis
ENST00000435753 0.165±0.00 0.381±0.00 0.233±0.00 1.664±1.43 0.387±0.00 1.685±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0000922 IDA spindle pole
GO:0003690 IDA double-stranded DNA binding
GO:0003697 IDA single-stranded DNA binding
GO:0003723 IEA RNA binding
GO:0004003 IEA ATP-dependent DNA helicase activity
GO:0004386 IDA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IDA nucleolus
GO:0006200 IEA ATP catabolic process
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0007062 IDA sister chromatid cohesion
GO:0008094 IDA DNA-dependent ATPase activity
GO:0016032 IEA viral process
GO:0016818 IEA hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030496 IDA midbody
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0032508 IEA DNA duplex unwinding
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163605 Ddx11-201 protein_coding Mus_musculus 0 1134

Loading