C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neutrophil cytosolic factor 1B pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435988 NCF1B-001 ENSG00000182487 9606 + 7:73220646-73235787 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000435988
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000435988 0.260±0.00 2.221±0.00 0.089±0.00 0.228±0.00 0.061±0.03 0.178±0.00 0.329±0.00 0.296±0.00 0.097±0.06 0.266±0.18 0.092±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UT CIL_0005UT_0001 CGP 7:72959485-73308867

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144086 Ncf1-003 protein_coding Mus_musculus 0 568
ENSMUST00000016094 Ncf1-002 protein_coding Mus_musculus 0 568
ENSMUST00000111275 Ncf1-001 protein_coding Mus_musculus 0 568
ENSMUST00000146354 Ncf1-004 nonsense_mediated_decay Mus_musculus 0 568
ENSMUST00000139249 Ncf1-005 retained_intron Mus_musculus 0 420

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