C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005UT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155428-ENSG00000130305 CGP 9606 7:72959485-73308867
GeneTranscriptPositionBiotype
ENSG00000130305 (NSUN5)
NOP2/Sun domain family, member 5 		ENST00000252594 (NSUN5-002) 73303230-73308806 protein_coding
ENST00000310326 (NSUN5-004) 73303235-73308816 protein_coding
ENST00000428206 (NSUN5-005) 73302517-73308804 protein_coding
ENST00000438747 (NSUN5-001) 73303230-73308867 protein_coding
ENST00000455763 (NSUN5-006) 73304316-73308553 nonsense_mediated_decay
ENST00000471461 (NSUN5-003) 73303225-73308816 retained_intron
ENST00000478977 (NSUN5-007) 73303931-73304703 retained_intron
ENSG00000155428 (TRIM74)
tripartite motif containing 74 		ENST00000285805 (TRIM74-002) 72959485-72969466 protein_coding
ENST00000395244 (TRIM74-001) 72959485-72966953 protein_coding
ENSG00000174384 (RP11-313P13.4)
 ENST00000333674 (RP11-313P13.4-001) 73093657-73105389 unprocessed_pseudogene
ENSG00000182487 (NCF1B)
neutrophil cytosolic factor 1B pseudogene 		ENST00000423083 (NCF1B-003) 73220639-73235945 processed_transcript
ENST00000432102 (NCF1B-002) 73220624-73230025 processed_transcript
ENST00000435988 (NCF1B-001) 73220646-73235787 transcribed_unprocessed_pseudogene
ENSG00000205578 (POM121B)
POM121 transmembrane nucleoporin B (pseudogene) 		ENST00000380760 (POM121B-001) 73293497-73301161 unprocessed_pseudogene
ENSG00000214544 (GTF2IRD2P1)
GTF2I repeat domain containing 2 pseudogene 1 		ENST00000449689 (GTF2IRD2P1-001) 73243271-73280119 transcribed_unprocessed_pseudogene
ENST00000618962 (GTF2IRD2P1-003) 73242751-73266840 retained_intron
ENST00000620147 (GTF2IRD2P1-002) 73242869-73271614 processed_transcript
ENSG00000229018 (RP11-313P13.3)
 ENST00000506558 (RP11-313P13.3-001) 73005541-73021103 unprocessed_pseudogene
ENSG00000233369 (RP11-396K3.1)
 ENST00000453092 (RP11-396K3.1-001) 73175415-73205441 transcribed_processed_pseudogene
ENST00000544802 (RP11-396K3.1-002) 73154938-73207283 processed_transcript
ENSG00000233523 (PHBP5)
prohibitin pseudogene 5 		ENST00000449310 (PHBP5-001) 73187969-73188736 processed_pseudogene
ENSG00000273626 (AC211476.1)
 ENST00000611043 (AC211476.1-201) 73068571-73068634 miRNA
ENSG00000273897 (CH17-264B6.4)
 ENST00000380410 (CH17-264B6.4-001) 73037371-73049246 unprocessed_pseudogene
ENSG00000274570 (AC006995.8)
 ENST00000576332 (AC006995.8-002) 73104201-73110129 processed_transcript
ENST00000612005 (AC006995.8-001) 73106385-73111140 transcribed_unprocessed_pseudogene
CIL_0005UT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053388-ENSMUSG00000000916 CGP 10090 5:135353295-135376805
GeneTranscriptPositionBiotype
ENSMUSG00000000916 (Nsun5)
NOL1/NOP2/Sun domain family, member 5 		ENSMUST00000000940 (Nsun5-001) 135369953-135376798 protein_coding
ENSMUST00000124453 (Nsun5-006) 135374179-135376034 retained_intron
ENSMUST00000126454 (Nsun5-005) 135371059-135371808 retained_intron
ENSMUST00000127746 (Nsun5-003) 135369970-135371403 processed_transcript
ENSMUST00000131863 (Nsun5-002) 135373652-135376805 processed_transcript
ENSMUST00000141867 (Nsun5-004) 135370927-135374084 retained_intron
ENSMUST00000170342 (Nsun5-007) 135369975-135374204 nonsense_mediated_decay
ENSMUSG00000053293 (Pom121)
nuclear pore membrane protein 121 		ENSMUST00000065638 (Pom121-002) 135376141-135394510 protein_coding
ENSMUST00000111171 (Pom121-001) 135376141-135394546 protein_coding
ENSMUSG00000053388 (Trim50)
tripartite motif-containing 50 		ENSMUST00000065785 (Trim50-001) 135353296-135368005 protein_coding
ENSMUST00000111180 (Trim50-002) 135353295-135367654 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UT_0001ENSG00000130305ENST00000252594ENST00000310326ENST00000428206ENST00000438747ENST00000455763ENST00000471461ENST00000478977ENSG00000155428ENST00000285805ENST00000395244ENSG00000174384ENST00000333674ENSG00000182487ENST00000423083ENST00000432102ENST00000435988ENSG00000205578ENST00000380760ENSG00000214544ENST00000449689ENST00000618962ENST00000620147ENSG00000229018ENST00000506558ENSG00000233369ENST00000453092ENST00000544802ENSG00000233523ENST00000449310ENSG00000273626ENST00000611043ENSG00000273897ENST00000380410ENSG00000274570ENST00000576332ENST00000612005CIL_0005UT_0002ENSMUSG00000000916ENSMUST00000000940ENSMUST00000124453ENSMUST00000126454ENSMUST00000127746ENSMUST00000131863ENSMUST00000141867ENSMUST00000170342ENSMUSG00000053293ENSMUST00000065638ENSMUST00000111171ENSMUSG00000053388ENSMUST00000065785ENSMUST00000111180
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UT_0001ENSG00000130305ENST00000252594ENST00000310326ENST00000438747ENST00000455763ENST00000471461ENST00000478977ENSG00000155428ENST00000285805ENST00000395244ENSG00000174384ENST00000333674ENSG00000182487ENST00000423083ENST00000432102ENST00000435988ENSG00000205578ENST00000380760ENSG00000214544ENST00000449689ENST00000618962ENST00000620147ENSG00000229018ENST00000506558ENSG00000233369ENST00000453092ENST00000544802ENSG00000233523ENST00000449310ENSG00000273626ENST00000611043ENSG00000273897ENST00000380410ENSG00000274570ENST00000576332ENST00000612005CIL_0005UT_0002ENSMUSG00000000916ENSMUST00000000940ENSMUST00000124453ENSMUSG00000053293ENSMUST00000065638ENSMUST00000111171ENSMUSG00000053388ENSMUST00000065785ENSMUST00000111180
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130305 ENST00000252594 N/A N/A N/A 0.451±0.00 0.374±0.00 1.225±0.36 0.324±0.00 1.188±0.00 N/A 0.595±0.00 2.401±0.00 4.558±2.69 N/A 2.214±0.00
ENST00000310326 4.714±0.00 7.541±0.00 N/A 4.394±0.00 5.795±0.00 3.424±0.00 0.629±0.00 3.391±0.00 0.371±0.14 N/A 2.698±0.00 4.066±0.00 1.720±0.10 4.858±0.00
ENST00000428206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438747 4.781±0.00 N/A N/A 2.561±0.11 1.812±0.00 2.155±0.00 1.116±0.50 2.071±0.00 2.145±0.00 1.946±0.67 8.335±0.00 11.679±7.33 9.593±1.30 8.140±2.43
ENST00000455763 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.907±0.00 N/A N/A N/A N/A
ENST00000471461 N/A 3.411±0.00 N/A 0.608±0.00 0.794±0.00 N/A 0.178±0.00 0.559±0.00 0.408±0.00 0.295±0.00 N/A 4.217±3.70 N/A 1.888±0.00
ENST00000478977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.367±0.00 N/A N/A N/A
ENSG00000155428 ENST00000285805 0.027±0.00 0.060±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00 N/A 0.745±0.00
ENST00000395244 0.027±0.00 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.150±0.00
ENSG00000174384 ENST00000333674 N/A N/A 0.546±0.00 0.542±0.00 0.156±0.00 N/A 0.134±0.00 0.528±0.00 N/A 0.354±0.00 N/A N/A N/A N/A
ENSG00000182487 ENST00000423083 N/A 0.323±0.00 N/A N/A 0.042±0.00 0.141±0.09 0.026±0.00 0.052±0.00 N/A 0.414±0.35 N/A 0.096±0.04 0.262±0.15 N/A
ENST00000432102 0.110±0.00 1.122±0.00 N/A N/A 0.116±0.00 0.476±0.00 0.122±0.00 0.061±0.00 0.587±0.00 0.314±0.00 0.025±0.00 0.268±0.12 2.082±0.01 0.073±0.00
ENST00000435988 0.260±0.00 2.221±0.00 N/A 0.089±0.00 0.228±0.00 0.061±0.03 0.178±0.00 N/A 0.329±0.00 0.296±0.00 N/A 0.097±0.06 0.266±0.18 0.092±0.00
ENSG00000205578 ENST00000380760 0.041±0.00 N/A 0.030±0.00 0.014±0.00 0.039±0.01 0.018±0.01 0.028±0.01 0.012±0.00 0.161±0.00 N/A 0.048±0.02 0.088±0.06 0.109±0.09 0.064±0.03
ENSG00000214544 ENST00000449689 N/A 0.051±0.00 N/A N/A N/A N/A N/A 0.086±0.00 0.043±0.00 0.016±0.00 N/A 0.036±0.02 N/A N/A
ENST00000618962 N/A N/A N/A 0.042±0.00 0.014±0.00 0.038±0.01 N/A N/A 0.050±0.00 N/A 0.110±0.00 0.074±0.05 0.056±0.03 N/A
ENST00000620147 0.005±0.00 0.072±0.00 N/A N/A 0.037±0.00 N/A 0.014±0.00 N/A 0.009±0.00 N/A N/A N/A N/A 0.108±0.01
ENSG00000229018 ENST00000506558 0.374±0.00 0.844±0.00 1.095±0.00 N/A 0.454±0.00 0.339±0.00 0.163±0.00 0.720±0.00 0.555±0.00 N/A N/A 1.435±0.09 N/A 0.449±0.00
ENSG00000233369 ENST00000453092 0.524±0.00 0.301±0.00 0.252±0.00 1.460±0.29 0.584±0.00 0.925±0.54 0.244±0.14 0.758±0.33 0.431±0.19 0.591±0.12 0.258±0.00 1.967±0.14 0.627±0.33 0.981±0.06
ENST00000544802 N/A N/A N/A 1.041±0.00 0.258±0.00 0.295±0.00 0.019±0.00 0.068±0.00 0.152±0.00 0.280±0.00 0.373±0.00 0.200±0.10 0.400±0.20 N/A
ENSG00000233523 ENST00000449310 N/A 0.054±0.00 N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00
ENSG00000273626 ENST00000611043 N/A N/A N/A N/A N/A N/A N/A N/A 0.970±0.00 N/A N/A N/A N/A N/A
ENSG00000273897 ENST00000380410 N/A N/A N/A 0.334±0.00 N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 N/A 0.089±0.00
ENSG00000274570 ENST00000576332 N/A 0.045±0.00 0.390±0.00 0.010±0.00 0.060±0.00 0.591±0.00 0.039±0.03 0.949±0.00 N/A 0.561±0.00 N/A 0.175±0.11 0.044±0.02 0.224±0.15
ENST00000612005 N/A 0.161±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 0.132±0.00 1.109±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000916 ENSMUST00000000940 5.129±0.46 9.518±0.58 3.568±0.32 6.696±0.00 6.773±0.96 6.414±0.47 4.433±0.19 4.047±1.19 4.795±1.68 6.145±0.85 1.716±0.13 10.772±1.80 4.243±0.27 N/A
ENSMUST00000124453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.826±0.00 10.796±0.00 N/A
ENSMUST00000126454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000053293 ENSMUST00000065638 N/A N/A N/A 1.862±0.00 1.188±0.00 N/A N/A N/A N/A N/A N/A 3.970±0.00 4.380±1.04 N/A
ENSMUST00000111171 5.321±1.67 11.372±0.39 4.971±0.68 9.300±3.03 7.516±2.55 8.454±1.45 3.605±0.69 4.432±0.32 4.346±2.87 6.706±1.01 2.966±0.48 9.362±2.08 9.463±6.01 24.138±15.89
ENSMUSG00000053388 ENSMUST00000065785 0.034±0.02 0.049±0.00 0.005±0.00 0.033±0.00 N/A 0.050±0.02 N/A 0.022±0.01 0.028±0.02 0.016±0.00 N/A 0.519±0.22 0.092±0.06 0.268±0.19
ENSMUST00000111180 0.043±0.01 0.091±0.03 N/A 0.005±0.00 N/A 0.030±0.00 0.021±0.00 0.059±0.02 0.012±0.01 N/A N/A 0.379±0.18 0.033±0.01 0.152±0.03

Loading