C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase N2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436111 PKN2-003 ENSG00000065243 9606 + 1:88771455-88804894 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000436111
Transcript ID Muscle
ENST00000436111 3.601±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RA CIL_0008RA_0001 VISTA 1:88110048-88711509
CIL_0009B7 CIL_0009B7_0001 VISTA 1:88161113-88762825

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174680 Pkn2-009 protein_coding Mus_musculus 0 854
ENSMUST00000172521 Pkn2-002 processed_transcript Mus_musculus 0 494
ENSMUST00000166330 Pkn2-003 processed_transcript Mus_musculus 0 494
ENSMUST00000174422 Pkn2-005 protein_coding Mus_musculus 0 494
ENSMUST00000173913 Pkn2-006 nonsense_mediated_decay Mus_musculus 0 494
ENSMUST00000043812 Pkn2-001 protein_coding Mus_musculus 0 494
ENSMUST00000173830 Pkn2-007 protein_coding Mus_musculus 0 363
ENSMUST00000174169 Pkn2-010 retained_intron Mus_musculus 0 326
ENSMUST00000173615 Pkn2-011 nonsense_mediated_decay Mus_musculus 0 324
ENSMUST00000174099 Pkn2-008 retained_intron Mus_musculus 0 311

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