C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MET proto-oncogene, receptor tyrosine kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436117 MET-201 ENSG00000105976 9606 + 7:116699085-116763080 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000436117
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000436117 3.193±0.00 2.574±0.00 5.976±0.00 3.369±0.00 0.989±0.00 9.853±0.00 2.494±0.00 3.792±0.00 3.436±0.00 13.492±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063L CIL_00063L_0002 CGP 7:116524785-116798386
CIL_00040Q CIL_00040Q_0001 CGP 7:116672390-116922049

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001886 IDA endothelial cell morphogenesis
GO:0004713 NAS protein tyrosine kinase activity
GO:0004872 IEA receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007165 TAS signal transduction
GO:0007166 NAS cell surface receptor signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0007411 TAS axon guidance
GO:0008283 TAS cell proliferation
GO:0009925 IDA basal plasma membrane
GO:0009986 IDA cell surface
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0019903 IPI protein phosphatase binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048754 IMP branching morphogenesis of an epithelial tube
GO:0050918 IDA positive chemotaxis
GO:0071526 IDA semaphorin-plexin signaling pathway
GO:1901299 IMP negative regulation of hydrogen peroxide-mediated programmed cell death
GO:2001028 IMP positive regulation of endothelial cell chemotaxis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080469 Met-201 protein_coding Mus_musculus 0 2305
ENSMUST00000115442 Met-003 protein_coding Mus_musculus 0 2305
ENSMUST00000145473 Met-002 retained_intron Mus_musculus 0 2305
ENSMUST00000115443 Met-001 protein_coding Mus_musculus 0 2305
ENSMUST00000140070 Met-004 protein_coding Mus_musculus 0 538

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