C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00063L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052004-ENSDARG00000052004 CGP 7955 25:19050766-19180696
GeneTranscriptPositionBiotype
ENSDARG00000052004 (cav1)
caveolin 1 		ENSDART00000061076 (cav1-201) 19050974-19180696 protein_coding
ENSDART00000148700 (cav1-002) 19051556-19062795 protein_coding
ENSDART00000149865 (cav1-001) 19050766-19064876 protein_coding
ENSDARG00000070903 (met)
met proto-oncogene (hepatocyte growth factor receptor) 		ENSDART00000104461 (met-201) 19074628-19166341 protein_coding
ENSDART00000148741 (met-001) 19071167-19166361 protein_coding
CIL_00063L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105974-ENSG00000105976 CGP 9606 7:116524785-116798386
GeneTranscriptPositionBiotype
ENSG00000105974 (CAV1)
caveolin 1, caveolae protein, 22kDa 		ENST00000341049 (CAV1-001) 116524785-116561176 protein_coding
ENST00000393467 (CAV1-003) 116526293-116561176 protein_coding
ENST00000393468 (CAV1-004) 116526277-116559513 protein_coding
ENST00000393470 (CAV1-006) 116525001-116559319 protein_coding
ENST00000405348 (CAV1-008) 116525740-116561179 protein_coding
ENST00000451122 (CAV1-002) 116525009-116559636 nonsense_mediated_decay
ENST00000456473 (CAV1-007) 116525982-116559257 protein_coding
ENST00000489856 (CAV1-005) 116525012-116527018 retained_intron
ENST00000614113 (CAV1-201) 116525009-116561184 protein_coding
ENSG00000105976 (MET)
MET proto-oncogene, receptor tyrosine kinase 		ENST00000318493 (MET-001) 116672405-116796342 protein_coding
ENST00000397752 (MET-002) 116672392-116798386 protein_coding
ENST00000422097 (MET-004) 116758517-116769909 protein_coding
ENST00000436117 (MET-201) 116699085-116763080 protein_coding
ENST00000454623 (MET-007) 116769666-116775072 protein_coding
ENST00000456159 (MET-005) 116672390-116699599 protein_coding
ENST00000495962 (MET-003) 116724146-116755414 processed_transcript
ENSG00000231210 (LINC01510)
long intergenic non-protein coding RNA 1510 		ENST00000441991 (LINC01510-002) 116571152-116614683 lincRNA
ENST00000450063 (LINC01510-001) 116570960-116573744 lincRNA
ENST00000458082 (LINC01510-003) 116573485-116614820 lincRNA
ENSG00000235427 (AC006159.5)
 ENST00000452009 (AC006159.5-001) 116542718-116551969 antisense
ENSG00000243220 (AC006159.4)
 ENST00000421965 (AC006159.4-001) 116563594-116571234 antisense
CIL_00063L_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000007655-ENSMUSG00000009376 CGP 10090 6:17306335-17573980
GeneTranscriptPositionBiotype
ENSMUSG00000007655 (Cav1)
caveolin 1, caveolae protein 		ENSMUST00000007799 (Cav1-001) 17306335-17341324 protein_coding
ENSMUST00000115453 (Cav1-002) 17307640-17341452 protein_coding
ENSMUST00000115454 (Cav1-007) 17307278-17339519 protein_coding
ENSMUST00000115455 (Cav1-009) 17306410-17339296 protein_coding
ENSMUST00000115456 (Cav1-008) 17306345-17340429 protein_coding
ENSMUST00000123439 (Cav1-006) 17307048-17339153 protein_coding
ENSMUST00000130505 (Cav1-003) 17306411-17327268 protein_coding
ENSMUST00000133065 (Cav1-004) 17307723-17327259 processed_transcript
ENSMUST00000150901 (Cav1-005) 17306423-17308203 protein_coding
ENSMUST00000177234 (Cav1-010) 17306411-17339351 nonsense_mediated_decay
ENSMUSG00000009376 (Met)
met proto-oncogene 		ENSMUST00000080469 (Met-201) 17491241-17571823 protein_coding
ENSMUST00000115442 (Met-003) 17464038-17572229 protein_coding
ENSMUST00000115443 (Met-001) 17463800-17573980 protein_coding
ENSMUST00000140070 (Met-004) 17463827-17491747 protein_coding
ENSMUST00000145473 (Met-002) 17464107-17541412 retained_intron
ENSMUST00000148903 (Met-005) 17546973-17553430 protein_coding
ENSMUST00000152802 (Met-006) 17535001-17547210 protein_coding
ENSMUSG00000085264 (Gm15581)
predicted gene 15581 		ENSMUST00000131334 (Gm15581-001) 17206823-17385604 antisense
ENSMUSG00000100101 (RP23-11G22.3)
predicted gene 29591 		ENSMUST00000188215 (RP23-11G22.3-001) 17347733-17348340 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063L_0001ENSDARG00000052004ENSDART00000061076ENSDART00000148700ENSDART00000149865ENSDARG00000070903ENSDART00000104461ENSDART00000148741CIL_00063L_0002ENSG00000105974ENST00000341049ENST00000393467ENST00000393468ENST00000393470ENST00000405348ENST00000451122ENST00000456473ENST00000489856ENST00000614113ENSG00000105976ENST00000318493ENST00000397752ENST00000422097ENST00000436117ENST00000454623ENST00000456159ENST00000495962ENSG00000231210ENST00000441991ENST00000450063ENST00000458082ENSG00000235427ENST00000452009ENSG00000243220ENST00000421965CIL_00063L_0003ENSMUSG00000007655ENSMUST00000007799ENSMUST00000115453ENSMUST00000115454ENSMUST00000115455ENSMUST00000115456ENSMUST00000123439ENSMUST00000130505ENSMUST00000133065ENSMUST00000150901ENSMUST00000177234ENSMUSG00000009376ENSMUST00000080469ENSMUST00000115442ENSMUST00000115443ENSMUST00000140070ENSMUST00000145473ENSMUST00000148903ENSMUST00000152802ENSMUSG00000085264ENSMUST00000131334ENSMUSG00000100101ENSMUST00000188215
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063L_0001ENSDARG00000052004ENSDART00000061076ENSDART00000148700ENSDART00000149865ENSDARG00000070903ENSDART00000104461ENSDART00000148741CIL_00063L_0002ENSG00000105974ENST00000341049ENST00000393467ENST00000393468ENST00000405348ENST00000456473ENST00000614113ENSG00000105976ENST00000318493ENST00000397752ENST00000436117ENSG00000231210ENST00000441991ENST00000450063ENST00000458082ENSG00000235427ENST00000452009ENSG00000243220ENST00000421965CIL_00063L_0003ENSMUSG00000007655ENSMUST00000007799ENSMUST00000115453ENSMUST00000115454ENSMUST00000115455ENSMUST00000115456ENSMUST00000133065ENSMUSG00000009376ENSMUST00000080469ENSMUST00000115442ENSMUST00000115443ENSMUST00000140070ENSMUSG00000085264ENSMUST00000131334ENSMUSG00000100101ENSMUST00000188215
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052004 ENSDART00000061076 N/A N/A N/A 1.054±0.33 N/A N/A N/A 1.501±0.15 1.792±0.00 N/A N/A N/A N/A N/A
ENSDART00000148700 N/A N/A N/A N/A N/A N/A 185.822±14.20 27.485±5.74 N/A N/A N/A N/A N/A N/A
ENSDART00000149865 N/A N/A N/A 4.067±2.54 N/A N/A 46.041±25.05 10.235±3.65 N/A N/A 21.726±0.00 N/A N/A N/A
ENSDARG00000070903 ENSDART00000104461 N/A N/A N/A 0.035±0.01 N/A N/A 0.148±0.04 0.272±0.00 2.174±0.00 N/A N/A N/A N/A N/A
ENSDART00000148741 N/A N/A N/A 0.890±0.43 N/A N/A N/A 0.800±0.00 1.456±0.00 N/A 0.223±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105974 ENST00000341049 19.334±0.00 7.597±0.00 1.433±0.00 0.613±0.35 34.515±19.28 18.604±5.71 18.635±0.78 1.646±0.26 39.401±0.00 25.727±0.16 3.380±0.89 7.333±3.74 38.642±2.35 7.215±3.55
ENST00000393467 37.902±0.00 11.193±0.00 0.702±0.00 0.329±0.00 88.328±84.97 14.911±9.17 21.116±0.00 2.697±0.00 11.010±9.58 35.943±3.03 6.250±0.00 13.778±11.06 53.082±10.53 9.182±5.65
ENST00000393468 N/A N/A N/A N/A 11.823±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405348 43.967±0.00 18.793±0.00 N/A 1.088±0.00 119.565±0.00 68.019±0.00 44.717±0.00 7.002±0.00 1.585±0.00 83.002±0.00 11.430±0.00 21.213±17.50 97.372±5.10 40.051±0.00
ENST00000451122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456473 N/A N/A N/A N/A 16.467±0.00 N/A N/A 5.041±0.00 N/A 59.216±0.00 10.361±0.00 13.888±6.17 194.871±0.00 17.443±0.00
ENST00000489856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614113 N/A N/A N/A N/A N/A N/A N/A N/A 0.402±0.00 N/A 1.614±0.00 N/A N/A N/A
ENSG00000105976 ENST00000318493 N/A N/A 2.706±0.00 0.912±0.00 2.871±0.00 1.244±0.00 0.742±0.00 4.919±0.00 1.865±0.00 6.659±0.00 N/A 6.535±0.00 N/A N/A
ENST00000397752 4.872±0.00 0.551±0.00 2.893±0.00 1.980±1.02 2.761±1.43 1.463±0.00 1.316±0.00 3.086±0.67 1.849±0.00 1.567±0.37 N/A 8.432±6.53 6.922±0.79 1.329±0.00
ENST00000422097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436117 N/A N/A 3.193±0.00 2.574±0.00 5.976±0.00 3.369±0.00 0.989±0.00 9.853±0.00 2.494±0.00 3.792±0.00 3.436±0.00 13.492±0.00 N/A N/A
ENST00000454623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231210 ENST00000441991 N/A N/A N/A N/A N/A N/A 0.081±0.00 0.362±0.00 N/A N/A N/A N/A N/A 0.035±0.00
ENST00000450063 N/A N/A N/A 0.110±0.00 N/A N/A N/A 0.880±0.00 N/A N/A N/A N/A 0.115±0.00 N/A
ENST00000458082 N/A N/A 3.404±0.00 N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A 0.092±0.00 0.069±0.00 0.085±0.00
ENSG00000235427 ENST00000452009 N/A 0.181±0.00 N/A N/A 0.326±0.00 N/A 0.181±0.00 N/A N/A N/A N/A 0.641±0.52 0.128±0.05 0.080±0.00
ENSG00000243220 ENST00000421965 N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007655 ENSMUST00000007799 301.548±159.67 11.848±2.54 226.661±15.00 3.199±1.54 116.023±18.29 18.498±2.10 46.524±3.52 9.264±1.38 1.148±0.93 201.534±21.52 34.579±4.69 29.503±18.87 18.367±17.13 1.907±1.09
ENSMUST00000115453 43.913±0.00 9.512±2.05 N/A N/A N/A N/A N/A 3.562±0.39 0.375±0.28 N/A 6.457±0.97 14.413±2.92 N/A 0.825±0.23
ENSMUST00000115454 498.941±208.41 42.005±12.57 N/A N/A 405.943±295.43 38.221±0.00 56.121±6.78 17.473±2.07 0.551±0.16 N/A N/A N/A 4.564±0.00 4.474±0.53
ENSMUST00000115455 N/A N/A N/A 7.177±0.00 N/A N/A N/A N/A N/A N/A N/A 86.494±0.00 124.119±0.00 N/A
ENSMUST00000115456 407.230±226.00 33.614±6.20 N/A 0.997±0.00 168.385±14.55 65.513±8.39 65.241±16.50 16.745±3.85 0.423±0.20 388.107±76.14 N/A 140.228±58.86 2.153±0.00 3.019±1.93
ENSMUST00000123439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133065 N/A 54.733±13.69 N/A N/A N/A 76.957±14.58 N/A 38.079±0.35 1.169±0.39 537.558±0.00 N/A N/A N/A N/A
ENSMUST00000150901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000009376 ENSMUST00000080469 N/A 0.466±0.17 N/A N/A 2.293±0.95 N/A N/A N/A N/A N/A N/A 1.132±0.33 N/A N/A
ENSMUST00000115442 2.553±0.70 N/A N/A 0.257±0.00 3.859±0.00 1.154±0.00 0.159±0.03 2.990±0.77 3.543±0.50 2.352±0.26 N/A N/A N/A 0.092±0.03
ENSMUST00000115443 4.190±0.89 0.525±0.21 6.914±0.04 0.514±0.24 4.080±1.15 4.762±0.77 0.244±0.12 12.279±1.22 3.988±1.55 7.523±0.27 1.667±0.63 2.218±0.67 1.116±0.48 0.127±0.05
ENSMUST00000140070 N/A 0.424±0.00 N/A N/A N/A 4.242±0.97 0.340±0.00 N/A N/A N/A N/A 1.786±0.00 N/A N/A
ENSMUST00000145473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085264 ENSMUST00000131334 N/A N/A N/A 0.005±0.00 N/A 0.046±0.00 N/A N/A 0.002±0.00 N/A N/A 0.080±0.01 0.004±0.00 0.014±0.01
ENSMUSG00000100101 ENSMUST00000188215 N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A 0.223±0.00

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