C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436587 C1GALT1-201 ENSG00000106392 9606 + 7:7182615-7248647 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000436587
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000436587 1.468±0.00 2.261±0.00 3.253±0.00 1.945±0.00 0.883±0.00 1.236±1.09 3.216±0.00 1.021±0.23 2.299±0.00 1.555±0.00 1.973±0.92 2.635±1.18 1.220±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001525 IMP angiogenesis
GO:0001822 IMP kidney development
GO:0005515 IPI protein binding
GO:0006486 IEA protein glycosylation
GO:0006493 IEA protein O-linked glycosylation
GO:0008378 IEA galactosyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IDA integral component of membrane
GO:0016263 IEA:IDA glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
GO:0016266 IEA:TAS O-glycan processing
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030154 IEA cell differentiation
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding
GO:0060576 IEA intestinal epithelial cell development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040159 C1galt1-001 protein_coding Mus_musculus 0 1517

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