C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribulose-5-phosphate-3-epimerase pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437636 RPEP4-001 ENSG00000233010 9606 + 22:29608900-29609501 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverOvaryPlacentaTestisENST00000437636
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENST00000437636 0.488±0.00 0.551±0.00 0.078±0.00 0.224±0.00 0.113±0.00 0.463±0.17 0.022±0.00 0.050±0.00 0.098±0.00 0.349±0.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190404 Rpe-005 nonsense_mediated_decay Mus_musculus 0 562
ENSMUST00000142920 Rpe-003 nonsense_mediated_decay Mus_musculus 0 520
ENSMUST00000113995 Rpe-002 protein_coding Mus_musculus 0 520
ENSMUST00000027157 Rpe-001 protein_coding Mus_musculus 0 520

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