C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein L7 pseudogene 54
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438336 RPL7P54-001 ENSG00000227645 9606 + X:78763226-78763899 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryTestisENST00000438336
Transcript ID Muscle Ovary Testis
ENST00000438336 0.014±0.00 0.021±0.00 0.029±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000C1 CIL_0000C1_0001 CGP X:78747709-78961954

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 560
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 538
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000149566 Rpl7-003 protein_coding Mus_musculus 0 514
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 418
ENSMUST00000125005 Rpl7-004 retained_intron Mus_musculus 0 335
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 222

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