C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149566 Rpl7-003 ENSMUSG00000043716 10090 - 1:16101780-16104227 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000149566
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000149566 93.496±64.54 15.628±1.56 282.205±31.73 137.887±46.22 147.791±71.47 90.734±7.15 56.224±7.32 105.660±21.01 173.642±142.33 99.590±17.11 41.558±7.67 229.311±144.04 261.609±169.07 40.324±5.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011X CIL_00011X_0002 CGP 1:16065979-16104662
CIL_0005C3 CIL_0005C3_0003 CGP 1:16101295-16133734

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333817 RPL7P26-001 processed_pseudogene Homo_sapiens 0 684
ENST00000402913 RPL7P58-001 processed_pseudogene Homo_sapiens 0 638
ENST00000404151 RPL7P25-001 processed_pseudogene Homo_sapiens 0 544
ENST00000425095 RPL7P37-001 processed_pseudogene Homo_sapiens 0 645
ENST00000427639 RPL7P2-001 processed_pseudogene Homo_sapiens 0 209
ENST00000428803 RPL7P7-001 processed_pseudogene Homo_sapiens 0 619
ENST00000437586 RPL7P11-001 processed_pseudogene Homo_sapiens 0 630
ENST00000438336 RPL7P54-001 processed_pseudogene Homo_sapiens 0 514
ENST00000438600 RP11-62E14.2-001 processed_pseudogene Homo_sapiens 1e-39 167
ENST00000444633 RPL7P36-001 processed_pseudogene Homo_sapiens 0 593
ENST00000446719 RPL7P12-001 processed_pseudogene Homo_sapiens 0 660
ENST00000447700 RPL7P59-001 processed_pseudogene Homo_sapiens 0 279
ENST00000450522 RPL7P55-001 processed_pseudogene Homo_sapiens 0 335
ENST00000461513 RPL7P48-001 processed_pseudogene Homo_sapiens 0 706
ENST00000478876 RPL7P43-001 processed_pseudogene Homo_sapiens 0 425
ENST00000479738 RPL7P16-001 processed_pseudogene Homo_sapiens 0 590
ENST00000485823 RPL7P41-001 processed_pseudogene Homo_sapiens 0 442

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